RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 MSCO60682 206 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 CYP2D6P10635 497 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 COL6A1P12109 1028 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 CCND3P30281 292 aaPredicted RBP18.06■□□□□ 0.48
RNF40-209ENST00000566703 ATP2B2Q01814 1243 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 EVX2Q03828 476 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 WDR78Q5VTH9 848 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 SIAH1Q8IUQ4 282 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 DYNLL2Q96FJ2 89 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 GDF15Q99988 308 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 BCL11AQ9H165 835 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 STAP2Q9UGK3 403 aa18.06■□□□□ 0.48
RNF40-209ENST00000566703 USP17L12C9JPN9 530 aa18.05■□□□□ 0.48
RNF40-209ENST00000566703 USP17L21D6R901 530 aa18.05■□□□□ 0.48
RNF40-209ENST00000566703 DSG3P32926 999 aa18.05■□□□□ 0.48
RNF40-209ENST00000566703 SLC44A5Q8NCS7 719 aa18.05■□□□□ 0.48
RNF40-209ENST00000566703 DDX60LQ5H9U9 1706 aaKnown RBP18.04■□□□□ 0.48
RNF40-209ENST00000566703 IGHA2P01877 340 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 AKR1B1P15121 316 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 CDK8P49336 464 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 SLFNL1Q499Z3 407 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 C7orf61Q8IZ16 206 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 NPLOC4Q8TAT6 608 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 MOV10L1Q9BXT6 1211 aaKnown RBP18.04■□□□□ 0.48
RNF40-209ENST00000566703 TANGO6Q9C0B7 1094 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 SPATC1LQ9H0A9 340 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 VCPKMTQ9H867 229 aa18.04■□□□□ 0.48
RNF40-209ENST00000566703 PFASO15067 1338 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 ICA1Q05084 483 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 DPP9Q86TI2 863 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 ABRAQ8N0Z2 381 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 MROH8Q9H579 483 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 KANSL2Q9H9L4 492 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 ECHDC1Q9NTX5 307 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 SLC5A4Q9NY91 659 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 FLRT1Q9NZU1 646 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 SLC4A4Q9Y6R1 1079 aa18.03■□□□□ 0.48
RNF40-209ENST00000566703 WDR46O15213 610 aaKnown RBP18.02■□□□□ 0.48
RNF40-209ENST00000566703 KIAA1755Q5JYT7 1200 aa18.02■□□□□ 0.48
RNF40-209ENST00000566703 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
RNF40-209ENST00000566703 OLFML2BQ68BL8 750 aa18.02■□□□□ 0.48
RNF40-209ENST00000566703 GIMAP6Q6P9H5 292 aa18.02■□□□□ 0.48
RNF40-209ENST00000566703 DCTPP1Q9H773 170 aa18.02■□□□□ 0.48
RNF40-209ENST00000566703 DDX20Q9UHI6 824 aaKnown RBP18.02■□□□□ 0.48
RNF40-209ENST00000566703 ZMYND8Q9ULU4 1186 aaPredicted RBP18.02■□□□□ 0.48
RNF40-209ENST00000566703 FLOT1O75955 427 aa18.01■□□□□ 0.47
RNF40-209ENST00000566703 ERCC3P19447 782 aa18.01■□□□□ 0.47
RNF40-209ENST00000566703 SBK1Q52WX2 424 aa18.01■□□□□ 0.47
RNF40-209ENST00000566703 CTR9Q6PD62 1173 aa18.01■□□□□ 0.47
RNF40-209ENST00000566703 STRBPQ96SI9 672 aaKnown RBP18.01■□□□□ 0.47
RNF40-209ENST00000566703 PUS7LQ9H0K6 701 aaKnown RBP18.01■□□□□ 0.47
RNF40-209ENST00000566703 ARPP21Q9UBL0 812 aaPredicted RBP18.01■□□□□ 0.47
RNF40-209ENST00000566703 ADAMTS5Q9UNA0 930 aa18.01■□□□□ 0.47
RNF40-209ENST00000566703 CEP290O15078 2479 aa18.01■□□□□ 0.47
RNF40-209ENST00000566703 NAV1Q8NEY1 1877 aa18.01■□□□□ 0.47
RNF40-209ENST00000566703 TRIOBPQ9H2D6 2365 aa18■□□□□ 0.47
RNF40-209ENST00000566703 CYP2D7A0A087X1C5 515 aa18■□□□□ 0.47
RNF40-209ENST00000566703 SMARCA5O60264 1052 aaPredicted RBP18■□□□□ 0.47
RNF40-209ENST00000566703 SLC25A27O95847 323 aa18■□□□□ 0.47
RNF40-209ENST00000566703 ADORA2AP29274 412 aa18■□□□□ 0.47
RNF40-209ENST00000566703 KBTBD3Q8NAB2 608 aa18■□□□□ 0.47
RNF40-209ENST00000566703 GPATCH3Q96I76 525 aa18■□□□□ 0.47
RNF40-209ENST00000566703 CHGBP05060 677 aa17.99■□□□□ 0.47
RNF40-209ENST00000566703 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
RNF40-209ENST00000566703 CNGA1P29973 690 aa17.99■□□□□ 0.47
RNF40-209ENST00000566703 CYP2C19P33261 490 aa17.99■□□□□ 0.47
RNF40-209ENST00000566703 GPR153Q6NV75 609 aa17.99■□□□□ 0.47
RNF40-209ENST00000566703 ATG4CQ96DT6 458 aa17.99■□□□□ 0.47
RNF40-209ENST00000566703 SMIM22K7EJ46 135 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 DNM1LO00429 736 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 COBLO75128 1261 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 ZFYP08048 801 aaPredicted RBP17.98■□□□□ 0.47
RNF40-209ENST00000566703 CYBAP13498 195 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 MAGEA10P43363 369 aaPredicted RBP17.98■□□□□ 0.47
RNF40-209ENST00000566703 LRRC26Q2I0M4 334 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 SPICE1Q8N0Z3 855 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 ARRDC4Q8NCT1 418 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 APPBP2Q92624 585 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 GOPCQ9HD26 462 aa17.98■□□□□ 0.47
RNF40-209ENST00000566703 FCER1AP12319 257 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 SYN1P17600 705 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 COPB2P35606 906 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 PLS1Q14651 629 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 TMEM132BQ14DG7 1078 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 LRRFIP1Q32MZ4 808 aaKnown RBP17.97■□□□□ 0.47
RNF40-209ENST00000566703 LRIT3Q3SXY7 679 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 NCAPG2Q86XI2 1143 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 CLEC10AQ8IUN9 316 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 TRPV1Q8NER1 839 aa17.97■□□□□ 0.47
RNF40-209ENST00000566703 SENP6Q9GZR1 1112 aaPredicted RBP17.97■□□□□ 0.47
RNF40-209ENST00000566703 ALPK3Q96L96 1907 aa17.96■□□□□ 0.47
RNF40-209ENST00000566703 GSG1L2A8MUP6 293 aa17.96■□□□□ 0.47
RNF40-209ENST00000566703 RNF113AO15541 343 aaKnown RBP17.96■□□□□ 0.47
RNF40-209ENST00000566703 SEPT4O43236 478 aa17.96■□□□□ 0.47
RNF40-209ENST00000566703 GNAT2P19087 354 aa17.96■□□□□ 0.47
RNF40-209ENST00000566703 RIOX2Q8IUF8 465 aa17.96■□□□□ 0.47
RNF40-209ENST00000566703 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
RNF40-209ENST00000566703 MKNK2Q9HBH9 465 aa17.96■□□□□ 0.47
RNF40-209ENST00000566703 NYAP2Q9P242 653 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms