RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 PALM3A6NDB9 673 aaPredicted RBP13.12□□□□□ -0.31
LINC00562-201ENST00000566385 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
LINC00562-201ENST00000566385 EGFRP00533 1210 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 NT5C2P49902 561 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 TOB1P50616 345 aaPredicted RBP13.12□□□□□ -0.31
LINC00562-201ENST00000566385 CAMK4Q16566 473 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 OGFOD1Q8N543 542 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 PHF20Q9BVI0 1012 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 CLIP2Q9UDT6 1046 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 KIF5BP33176 963 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 ME1P48163 572 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 JAG1P78504 1218 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 SF3A1Q15459 793 aaKnown RBP13.11□□□□□ -0.31
LINC00562-201ENST00000566385 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
LINC00562-201ENST00000566385 EHD4Q9H223 541 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 VPS33BQ9H267 617 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
LINC00562-201ENST00000566385 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 SWAP70Q9UH65 585 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 PLIN4Q96Q06 1357 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 TOP1P11387 765 aaKnown RBP13.11□□□□□ -0.31
LINC00562-201ENST00000566385 MARCKSP29966 332 aaPredicted RBP13.11□□□□□ -0.31
LINC00562-201ENST00000566385 RRP1BQ14684 758 aaKnown RBP13.11□□□□□ -0.31
LINC00562-201ENST00000566385 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 ATL3Q6DD88 541 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 LRSAM1Q6UWE0 723 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 RGS22Q8NE09 1264 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
LINC00562-201ENST00000566385 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 SCG2P13521 617 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 NASPP49321 788 aaPredicted RBP13.1□□□□□ -0.31
LINC00562-201ENST00000566385 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
LINC00562-201ENST00000566385 CCDC183Q5T5S1 534 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 RBSNQ9H1K0 784 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 ZNF70Q9UC06 446 aaPredicted RBP13.1□□□□□ -0.31
LINC00562-201ENST00000566385 FRMPD2Q68DX3 1309 aaPredicted RBP13.1□□□□□ -0.31
LINC00562-201ENST00000566385 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
LINC00562-201ENST00000566385 GDF11O95390 407 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 PDHBP11177 359 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 ATP2B2Q01814 1243 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 STK38Q15208 465 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 CIAPIN1Q6FI81 312 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 CSRNP1Q96S65 589 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
LINC00562-201ENST00000566385 MYH4Q9Y623 1939 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 WNT10BO00744 389 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 WNT7AO00755 349 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 SPTLC2O15270 562 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 NPM3O75607 178 aaKnown RBP13.09□□□□□ -0.31
LINC00562-201ENST00000566385 PTPAQ15257 358 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 SAFBQ15424 915 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00562-201ENST00000566385 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
LINC00562-201ENST00000566385 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
LINC00562-201ENST00000566385 AGBL3Q8NEM8 1001 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 SYAP1Q96A49 352 aaPredicted RBP13.09□□□□□ -0.31
LINC00562-201ENST00000566385 FOXP1Q9H334 677 aaPredicted RBP13.09□□□□□ -0.31
LINC00562-201ENST00000566385 VEZTQ9HBM0 779 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 CNTNAP1P78357 1384 aa13.09□□□□□ -0.31
LINC00562-201ENST00000566385 ENTPD3O75355 529 aa13.08□□□□□ -0.31
LINC00562-201ENST00000566385 TTLL1O95922 423 aa13.08□□□□□ -0.31
LINC00562-201ENST00000566385 ATP2B1P20020 1258 aa13.08□□□□□ -0.31
LINC00562-201ENST00000566385 SNW1Q13573 536 aaKnown RBP13.08□□□□□ -0.31
LINC00562-201ENST00000566385 TATDN1Q6P1N9 297 aa13.08□□□□□ -0.31
LINC00562-201ENST00000566385 VAT1LQ9HCJ6 419 aa13.08□□□□□ -0.31
LINC00562-201ENST00000566385 PCDHB6Q9Y5E3 794 aa13.08□□□□□ -0.31
LINC00562-201ENST00000566385 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.31
LINC00562-201ENST00000566385 A0A1B0GVL5 298 aa13.08□□□□□ -0.32
LINC00562-201ENST00000566385 YEATS4O95619 227 aa13.08□□□□□ -0.32
LINC00562-201ENST00000566385 PARP1P09874 1014 aaKnown RBP13.08□□□□□ -0.32
LINC00562-201ENST00000566385 SLC39A14Q15043 492 aa13.08□□□□□ -0.32
LINC00562-201ENST00000566385 RBM26Q5T8P6 1007 aaKnown RBP13.08□□□□□ -0.32
LINC00562-201ENST00000566385 SIAH1Q8IUQ4 282 aa13.08□□□□□ -0.32
LINC00562-201ENST00000566385 TMEM39BQ9GZU3 492 aa13.08□□□□□ -0.32
LINC00562-201ENST00000566385 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.32
LINC00562-201ENST00000566385 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.07□□□□□ -0.32
LINC00562-201ENST00000566385 MRE11P49959 708 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 SEPT2Q15019 361 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 AXDND1Q5T1B0 1012 aaPredicted RBP13.07□□□□□ -0.32
LINC00562-201ENST00000566385 HOMER1Q86YM7 354 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 XBP1P17861 261 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 ADALQ6DHV7 355 aa13.07□□□□□ -0.32
LINC00562-201ENST00000566385 METTL16Q86W50 562 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms