RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ANO2Q9NQ90 1003 aa24.9■■□□□ 1.58
SHCBP1-205ENST00000566016 TCP11L1Q9NUJ3 509 aa24.9■■□□□ 1.58
SHCBP1-205ENST00000566016 RBM8AQ9Y5S9 174 aaKnown RBP24.9■■□□□ 1.58
SHCBP1-205ENST00000566016 FKTNO75072 461 aa24.89■■□□□ 1.58
SHCBP1-205ENST00000566016 IRX3P78415 501 aaPredicted RBP24.89■■□□□ 1.58
SHCBP1-205ENST00000566016 SMCR8Q8TEV9 937 aaPredicted RBP24.89■■□□□ 1.58
SHCBP1-205ENST00000566016 USP17L15C9J2P7 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 USP17L13C9JLJ4 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 USP17L11C9JVI0 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 USP17L18D6R9N7 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 USP17L22D6RA61 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 USP17L17D6RBQ6 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 USP17L19D6RCP7 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 USP17L20D6RJB6 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 ATP2B2Q01814 1243 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 USP17L24Q0WX57 530 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 RRP12Q5JTH9 1297 aaKnown RBP24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 KRT23Q9C075 422 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 IL17RBQ9NRM6 502 aa24.89■■□□□ 1.57
SHCBP1-205ENST00000566016 MGAMO43451 1857 aa24.88■■□□□ 1.57
SHCBP1-205ENST00000566016 A0A0G2JMZ2 1700 aa24.88■■□□□ 1.57
SHCBP1-205ENST00000566016 WDR46O15213 610 aaKnown RBP24.88■■□□□ 1.57
SHCBP1-205ENST00000566016 BCRP11274 1271 aa24.88■■□□□ 1.57
SHCBP1-205ENST00000566016 GCLCP48506 637 aaPredicted RBP24.88■■□□□ 1.57
SHCBP1-205ENST00000566016 SP3Q02447 781 aa24.88■■□□□ 1.57
SHCBP1-205ENST00000566016 GTF3C2Q8WUA4 911 aaPredicted RBP24.88■■□□□ 1.57
SHCBP1-205ENST00000566016 CLIP2Q9UDT6 1046 aa24.88■■□□□ 1.57
SHCBP1-205ENST00000566016 KIAA1755Q5JYT7 1200 aa24.87■■□□□ 1.57
SHCBP1-205ENST00000566016 CATSPERGQ6ZRH7 1159 aa24.87■■□□□ 1.57
SHCBP1-205ENST00000566016 GMCL1P1Q8NEA9 526 aa24.87■■□□□ 1.57
SHCBP1-205ENST00000566016 RPAP3Q9H6T3 665 aaPredicted RBP24.87■■□□□ 1.57
SHCBP1-205ENST00000566016 ERO1AQ96HE7 468 aa24.86■■□□□ 1.57
SHCBP1-205ENST00000566016 NMT2O60551 498 aa24.85■■□□□ 1.57
SHCBP1-205ENST00000566016 HERVK_113P62684 666 aa24.85■■□□□ 1.57
SHCBP1-205ENST00000566016 NECTIN1Q15223 517 aa24.85■■□□□ 1.57
SHCBP1-205ENST00000566016 FAM110CQ1W6H9 321 aa24.85■■□□□ 1.57
SHCBP1-205ENST00000566016 LBX2Q6XYB7 198 aa24.85■■□□□ 1.57
SHCBP1-205ENST00000566016 CPA4Q9UI42 421 aa24.85■■□□□ 1.57
SHCBP1-205ENST00000566016 STX8Q9UNK0 236 aa24.85■■□□□ 1.57
SHCBP1-205ENST00000566016 B4E1Z4 1266 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 F5H6K3 240 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 KDM4AO75164 1064 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 KLRC3Q07444 240 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 CCDC178Q5BJE1 867 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 IQCA1Q86XH1 822 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 SPICE1Q8N0Z3 855 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 TTC14Q96N46 770 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 MYPNQ86TC9 1320 aa24.84■■□□□ 1.57
SHCBP1-205ENST00000566016 NDUFB10O96000 172 aa24.83■■□□□ 1.57
SHCBP1-205ENST00000566016 TRDNQ13061 729 aa24.83■■□□□ 1.57
SHCBP1-205ENST00000566016 NKX2-3Q8TAU0 364 aa24.83■■□□□ 1.57
SHCBP1-205ENST00000566016 P2RX7Q99572 595 aaKnown RBP24.83■■□□□ 1.57
SHCBP1-205ENST00000566016 EPB41L2O43491 1005 aaKnown RBP24.83■■□□□ 1.56
SHCBP1-205ENST00000566016 REC8O95072 547 aa24.83■■□□□ 1.56
SHCBP1-205ENST00000566016 LACTBP83111 547 aaPredicted RBP24.83■■□□□ 1.56
SHCBP1-205ENST00000566016 LRRC47Q8N1G4 583 aaKnown RBP24.83■■□□□ 1.56
SHCBP1-205ENST00000566016 TANGO6Q9C0B7 1094 aa24.83■■□□□ 1.56
SHCBP1-205ENST00000566016 ZSWIM5Q9P217 1185 aa24.83■■□□□ 1.56
SHCBP1-205ENST00000566016 MORF4L1Q9UBU8 362 aa24.83■■□□□ 1.56
SHCBP1-205ENST00000566016 ZSWIM8A7E2V4 1837 aa24.82■■□□□ 1.56
SHCBP1-205ENST00000566016 HTTP42858 3142 aa24.82■■□□□ 1.56
SHCBP1-205ENST00000566016 E7EWF7 191 aa24.82■■□□□ 1.56
SHCBP1-205ENST00000566016 COG2Q14746 738 aa24.82■■□□□ 1.56
SHCBP1-205ENST00000566016 RNF20Q5VTR2 975 aa24.82■■□□□ 1.56
SHCBP1-205ENST00000566016 RCSD1Q6JBY9 416 aa24.82■■□□□ 1.56
SHCBP1-205ENST00000566016 DGKHQ86XP1 1220 aa24.82■■□□□ 1.56
SHCBP1-205ENST00000566016 TAF6LQ9Y6J9 622 aa24.82■■□□□ 1.56
SHCBP1-205ENST00000566016 SLC27A2O14975 620 aa24.81■■□□□ 1.56
SHCBP1-205ENST00000566016 TOP1P11387 765 aaKnown RBP24.81■■□□□ 1.56
SHCBP1-205ENST00000566016 COL13A1Q5TAT6 717 aaPredicted RBP24.81■■□□□ 1.56
SHCBP1-205ENST00000566016 CREB3L3Q68CJ9 461 aa24.81■■□□□ 1.56
SHCBP1-205ENST00000566016 NCOA7Q8NI08 942 aa24.81■■□□□ 1.56
SHCBP1-205ENST00000566016 GMCL1Q96IK5 515 aa24.81■■□□□ 1.56
SHCBP1-205ENST00000566016 HOXC10Q9NYD6 342 aa24.81■■□□□ 1.56
SHCBP1-205ENST00000566016 COL11A1P12107 1806 aaPredicted RBP24.81■■□□□ 1.56
SHCBP1-205ENST00000566016 DOCK3Q8IZD9 2030 aa24.8■■□□□ 1.56
SHCBP1-205ENST00000566016 SPDYE16A6NNV3 312 aaPredicted RBP24.8■■□□□ 1.56
SHCBP1-205ENST00000566016 ARHGEF6Q15052 776 aa24.8■■□□□ 1.56
SHCBP1-205ENST00000566016 STOX1Q6ZVD7 989 aa24.8■■□□□ 1.56
SHCBP1-205ENST00000566016 CTU1Q7Z7A3 348 aaKnown RBP24.8■■□□□ 1.56
SHCBP1-205ENST00000566016 RALYLQ86SE5 291 aaKnown RBP24.8■■□□□ 1.56
SHCBP1-205ENST00000566016 ANKRD13CQ8N6S4 541 aa24.8■■□□□ 1.56
SHCBP1-205ENST00000566016 GNRH1P01148 92 aa24.79■■□□□ 1.56
SHCBP1-205ENST00000566016 KIF22Q14807 665 aa24.79■■□□□ 1.56
SHCBP1-205ENST00000566016 FAM83BQ5T0W9 1011 aa24.79■■□□□ 1.56
SHCBP1-205ENST00000566016 CD99L2Q8TCZ2 262 aa24.79■■□□□ 1.56
SHCBP1-205ENST00000566016 ANKS1AQ92625 1134 aa24.79■■□□□ 1.56
SHCBP1-205ENST00000566016 ZSCAN10Q96SZ4 725 aaPredicted RBP24.79■■□□□ 1.56
SHCBP1-205ENST00000566016 RABGAP1Q9Y3P9 1069 aa24.79■■□□□ 1.56
SHCBP1-205ENST00000566016 RAD21O60216 631 aa24.78■■□□□ 1.56
SHCBP1-205ENST00000566016 FLOT1O75955 427 aa24.78■■□□□ 1.56
SHCBP1-205ENST00000566016 SLFN13Q68D06 897 aa24.78■■□□□ 1.56
SHCBP1-205ENST00000566016 MB21D1Q8N884 522 aa24.78■■□□□ 1.56
SHCBP1-205ENST00000566016 TMEM47Q9BQJ4 181 aa24.78■■□□□ 1.56
SHCBP1-205ENST00000566016 UBAC1Q9BSL1 405 aa24.78■■□□□ 1.56
SHCBP1-205ENST00000566016 RBPJLQ9UBG7 517 aa24.78■■□□□ 1.56
SHCBP1-205ENST00000566016 TNKSO95271 1327 aa24.78■■□□□ 1.56
SHCBP1-205ENST00000566016 DSG3P32926 999 aa24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 PKN2Q16513 984 aaKnown RBP24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 TSGA10IPQ3SY00 556 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms