RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SERINC3Q13530 473 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 RAB33AQ14088 237 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 PRRT3Q5FWE3 981 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 JAZF1Q86VZ6 243 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 PPFIBP1Q86W92 1011 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 REXO1Q8N1G1 1221 aaKnown RBP6.09□□□□□ -1.43
LINC00561-201ENST00000565815 FAM13CQ8NE31 585 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 TMEM40Q8WWA1 233 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 SUGCTQ9HAC7 445 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 PRKAG3Q9UGI9 489 aa6.09□□□□□ -1.43
LINC00561-201ENST00000565815 CEP170BQ9Y4F5 1589 aaPredicted RBP6.09□□□□□ -1.44
LINC00561-201ENST00000565815 SUPT6HQ7KZ85 1726 aaKnown RBP6.08□□□□□ -1.44
LINC00561-201ENST00000565815 SHANK2Q9UPX8 1470 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 UBOX5O94941 541 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 SLFN14P0C7P3 912 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 TMEM192Q8IY95 271 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 NLGN1Q8N2Q7 840 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 SMG8Q8ND04 991 aaKnown RBP6.08□□□□□ -1.44
LINC00561-201ENST00000565815 LENG1Q96BZ8 264 aaPredicted RBP6.08□□□□□ -1.44
LINC00561-201ENST00000565815 CYP4F12Q9HCS2 524 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 ABCA6Q8N139 1617 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 MYO3AQ8NEV4 1616 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 GJB6O95452 261 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 HSPA1LP34931 641 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 RASA3Q14644 834 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 SMYD4Q8IYR2 804 aaPredicted RBP6.08□□□□□ -1.44
LINC00561-201ENST00000565815 PHACTR4Q8IZ21 702 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 RNF214Q8ND24 703 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 TMEM87BQ96K49 555 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 OSBPL2Q9H1P3 480 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 GMIPQ9P107 970 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 MINPP1Q9UNW1 487 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 MRPL42Q9Y6G3 142 aaKnown RBP6.08□□□□□ -1.44
LINC00561-201ENST00000565815 SNCAIPQ9Y6H5 919 aa6.08□□□□□ -1.44
LINC00561-201ENST00000565815 ZNF335Q9H4Z2 1342 aaPredicted RBP6.07□□□□□ -1.44
LINC00561-201ENST00000565815 C1QTNF9BB2RNN3 333 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 LEFTY1O75610 366 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 BMP3P12645 472 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 UNC5AQ6ZN44 842 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 CRBNQ96SW2 442 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 SNTG2Q9NY99 539 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 MAPK8IP1Q9UQF2 711 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 ITSN2Q9NZM3 1697 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 SYNMO15061 1565 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 ABCC1P33527 1531 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 ROBO2Q9HCK4 1378 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 TP53P04637 393 aaPredicted RBP6.07□□□□□ -1.44
LINC00561-201ENST00000565815 NME1P15531 152 aaKnown RBP6.07□□□□□ -1.44
LINC00561-201ENST00000565815 SPATC1Q76KD6 591 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 ARMCX6Q7L4S7 300 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 MCATQ8IVS2 390 aaKnown RBP6.07□□□□□ -1.44
LINC00561-201ENST00000565815 PIDD1Q9HB75 910 aa6.07□□□□□ -1.44
LINC00561-201ENST00000565815 DEPDC5O75140 1603 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 K7ELQ4 463 aaPredicted RBP6.06□□□□□ -1.44
LINC00561-201ENST00000565815 DCAF15Q66K64 600 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 SLC6A18Q96N87 628 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 TRIM55Q9BYV6 548 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 ACSS3Q9H6R3 686 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 ACTR10Q9NZ32 417 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 PFDN2Q9UHV9 154 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 TACC3Q9Y6A5 838 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 POLR1AO95602 1720 aaPredicted RBP6.06□□□□□ -1.44
LINC00561-201ENST00000565815 HMX2A2RU54 273 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 MEGF11A6BM72 1044 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 MEIS3P2A8K0S8 358 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 GUCY2CP25092 1073 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 CKAP2LQ8IYA6 745 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 TMEM130Q8N3G9 435 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 KLHL6Q8WZ60 621 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 UTP4Q969X6 686 aaKnown RBP6.06□□□□□ -1.44
LINC00561-201ENST00000565815 DCAF5Q96JK2 942 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 SRPK1Q96SB4 655 aaKnown RBP6.06□□□□□ -1.44
LINC00561-201ENST00000565815 SSU72Q9NP77 194 aaKnown RBP6.06□□□□□ -1.44
LINC00561-201ENST00000565815 MED14O60244 1454 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 PREX2Q70Z35 1606 aa6.06□□□□□ -1.44
LINC00561-201ENST00000565815 ADMP35318 185 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 SNW1Q13573 536 aaKnown RBP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 DDR2Q16832 855 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 GSX1Q9H4S2 264 aaPredicted RBP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 NOP53Q9NZM5 478 aaKnown RBP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 KIAA1107Q9UPP5 1409 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 CCDC18Q5T9S5 1454 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 FANCGO15287 622 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 LRRN2O75325 713 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 SLITRK5O94991 958 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 RAG1P15918 1043 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 RXRBP28702 533 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 ZNF662Q6ZS27 426 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 Q6ZS46 218 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 ANKLE2Q86XL3 938 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 THEMISQ8N1K5 641 aaPredicted RBP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 PPP1R13LQ8WUF5 828 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 FAM46AQ96IP4 442 aaKnown RBP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 KCNF1Q9H3M0 494 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 NLRP1Q9C000 1473 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 RNF17Q9BXT8 1623 aaKnown RBP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 PRR33A8MZF0 331 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 DDAH1O94760 285 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms