RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 C16orf86Q6ZW13 317 aa28.59■■■□□ 2.17
RAB40C-209ENST00000565511 OTUD7AQ8TE49 926 aaPredicted RBP28.59■■■□□ 2.17
RAB40C-209ENST00000565511 APBA2Q99767 749 aa28.59■■■□□ 2.17
RAB40C-209ENST00000565511 COL11A1P12107 1806 aaPredicted RBP28.58■■■□□ 2.17
RAB40C-209ENST00000565511 CCND3P30281 292 aaPredicted RBP28.58■■■□□ 2.17
RAB40C-209ENST00000565511 MAP2K5Q13163 448 aa28.58■■■□□ 2.17
RAB40C-209ENST00000565511 CCAR1Q8IX12 1150 aaKnown RBP28.58■■■□□ 2.17
RAB40C-209ENST00000565511 OSBP2Q969R2 916 aa28.58■■■□□ 2.17
RAB40C-209ENST00000565511 STRBPQ96SI9 672 aaKnown RBP28.58■■■□□ 2.17
RAB40C-209ENST00000565511 ICA1Q05084 483 aa28.57■■■□□ 2.16
RAB40C-209ENST00000565511 WDR78Q5VTH9 848 aa28.57■■■□□ 2.16
RAB40C-209ENST00000565511 SPICE1Q8N0Z3 855 aa28.57■■■□□ 2.16
RAB40C-209ENST00000565511 KBTBD3Q8NAB2 608 aa28.57■■■□□ 2.16
RAB40C-209ENST00000565511 TANGO6Q9C0B7 1094 aa28.57■■■□□ 2.16
RAB40C-209ENST00000565511 ZNF236Q9UL36 1845 aa28.57■■■□□ 2.16
RAB40C-209ENST00000565511 PTPREP23469 700 aa28.56■■■□□ 2.16
RAB40C-209ENST00000565511 PRO3102Q9H379 93 aa28.56■■■□□ 2.16
RAB40C-209ENST00000565511 RBM27Q9P2N5 1060 aaKnown RBP28.56■■■□□ 2.16
RAB40C-209ENST00000565511 OGDHLQ9ULD0 1010 aa28.56■■■□□ 2.16
RAB40C-209ENST00000565511 TMX2Q9Y320 296 aa28.56■■■□□ 2.16
RAB40C-209ENST00000565511 CCNA1P78396 465 aa28.55■■■□□ 2.16
RAB40C-209ENST00000565511 ZSCAN25Q6NSZ9 544 aa28.55■■■□□ 2.16
RAB40C-209ENST00000565511 NPLOC4Q8TAT6 608 aa28.55■■■□□ 2.16
RAB40C-209ENST00000565511 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.55■■■□□ 2.16
RAB40C-209ENST00000565511 EPB41L4AQ9HCS5 686 aaPredicted RBP28.55■■■□□ 2.16
RAB40C-209ENST00000565511 SLC15A5A6NIM6 579 aa28.54■■■□□ 2.16
RAB40C-209ENST00000565511 GSG1L2A8MUP6 293 aa28.54■■■□□ 2.16
RAB40C-209ENST00000565511 M0R2C6 588 aa28.54■■■□□ 2.16
RAB40C-209ENST00000565511 GRB14Q14449 540 aa28.54■■■□□ 2.16
RAB40C-209ENST00000565511 COG2Q14746 738 aa28.54■■■□□ 2.16
RAB40C-209ENST00000565511 NECAB2Q7Z6G3 386 aa28.54■■■□□ 2.16
RAB40C-209ENST00000565511 ANKLE1Q8NAG6 615 aa28.54■■■□□ 2.16
RAB40C-209ENST00000565511 MOV10L1Q9BXT6 1211 aaKnown RBP28.54■■■□□ 2.16
RAB40C-209ENST00000565511 VCPKMTQ9H867 229 aa28.54■■■□□ 2.16
RAB40C-209ENST00000565511 CWC22Q9HCG8 908 aaKnown RBP28.54■■■□□ 2.16
RAB40C-209ENST00000565511 LHX8Q68G74 356 aa28.53■■■□□ 2.16
RAB40C-209ENST00000565511 TRMT44Q8IYL2 757 aaKnown RBP28.53■■■□□ 2.16
RAB40C-209ENST00000565511 STK11IPQ8N1F8 1099 aa28.53■■■□□ 2.16
RAB40C-209ENST00000565511 ATG4CQ96DT6 458 aa28.53■■■□□ 2.16
RAB40C-209ENST00000565511 PCDH10Q9P2E7 1040 aa28.53■■■□□ 2.16
RAB40C-209ENST00000565511 PFASO15067 1338 aa28.52■■■□□ 2.16
RAB40C-209ENST00000565511 EVI5O60447 810 aa28.52■■■□□ 2.16
RAB40C-209ENST00000565511 EEF2P13639 858 aaKnown RBP28.52■■■□□ 2.16
RAB40C-209ENST00000565511 CAPN2P17655 700 aa28.52■■■□□ 2.16
RAB40C-209ENST00000565511 DSG3P32926 999 aa28.52■■■□□ 2.16
RAB40C-209ENST00000565511 RRP1P56182 461 aaKnown RBP28.52■■■□□ 2.16
RAB40C-209ENST00000565511 PI4K2BQ8TCG2 481 aa28.52■■■□□ 2.16
RAB40C-209ENST00000565511 APPBP2Q92624 585 aa28.52■■■□□ 2.16
RAB40C-209ENST00000565511 CCDC17Q96LX7 622 aa28.52■■■□□ 2.16
RAB40C-209ENST00000565511 ARHGEF10LQ9HCE6 1279 aa28.52■■■□□ 2.16
RAB40C-209ENST00000565511 RNF113AO15541 343 aaKnown RBP28.51■■■□□ 2.15
RAB40C-209ENST00000565511 IGHA2P01877 340 aa28.51■■■□□ 2.15
RAB40C-209ENST00000565511 SPATC1LQ9H0A9 340 aa28.51■■■□□ 2.15
RAB40C-209ENST00000565511 ARPP21Q9UBL0 812 aaPredicted RBP28.51■■■□□ 2.15
RAB40C-209ENST00000565511 NR2E3Q9Y5X4 410 aa28.51■■■□□ 2.15
RAB40C-209ENST00000565511 SZT2Q5T011 3432 aa28.51■■■□□ 2.15
RAB40C-209ENST00000565511 ROBO3Q96MS0 1386 aa28.5■■■□□ 2.15
RAB40C-209ENST00000565511 HOXC6P09630 235 aa28.5■■■□□ 2.15
RAB40C-209ENST00000565511 AMOTL1Q8IY63 956 aa28.5■■■□□ 2.15
RAB40C-209ENST00000565511 LPAR1Q92633 364 aa28.5■■■□□ 2.15
RAB40C-209ENST00000565511 DDRGK1Q96HY6 314 aa28.5■■■□□ 2.15
RAB40C-209ENST00000565511 GPATCH3Q96I76 525 aa28.5■■■□□ 2.15
RAB40C-209ENST00000565511 FBXO28Q9NVF7 368 aa28.5■■■□□ 2.15
RAB40C-209ENST00000565511 ZNFX1Q9P2E3 1918 aaKnown RBP28.49■■■□□ 2.15
RAB40C-209ENST00000565511 GPAA1O43292 621 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 FLOT1O75955 427 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 RASA1P20936 1047 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 ATP2B2Q01814 1243 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 SBK1Q52WX2 424 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 SAMD1Q6SPF0 538 aaPredicted RBP28.49■■■□□ 2.15
RAB40C-209ENST00000565511 TRPV1Q8NER1 839 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 NBPF3Q9H094 633 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 C11orf49Q9H6J7 331 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 HOXC10Q9NYD6 342 aa28.49■■■□□ 2.15
RAB40C-209ENST00000565511 GLRX3O76003 335 aaKnown RBP28.48■■■□□ 2.15
RAB40C-209ENST00000565511 ERCC3P19447 782 aa28.48■■■□□ 2.15
RAB40C-209ENST00000565511 C7orf61Q8IZ16 206 aa28.48■■■□□ 2.15
RAB40C-209ENST00000565511 CRBNQ96SW2 442 aa28.48■■■□□ 2.15
RAB40C-209ENST00000565511 SEC62Q99442 399 aaKnown RBP28.48■■■□□ 2.15
RAB40C-209ENST00000565511 MYH4Q9Y623 1939 aa28.47■■■□□ 2.15
RAB40C-209ENST00000565511 WDR46O15213 610 aaKnown RBP28.47■■■□□ 2.15
RAB40C-209ENST00000565511 ADORA2AP29274 412 aa28.47■■■□□ 2.15
RAB40C-209ENST00000565511 CYP2C19P33261 490 aa28.47■■■□□ 2.15
RAB40C-209ENST00000565511 IVNS1ABPQ9Y6Y0 642 aa28.47■■■□□ 2.15
RAB40C-209ENST00000565511 SALL3Q9BXA9 1300 aa28.46■■■□□ 2.15
RAB40C-209ENST00000565511 MINDY4BA8MYZ0 360 aa28.46■■■□□ 2.15
RAB40C-209ENST00000565511 COBLO75128 1261 aa28.46■■■□□ 2.15
RAB40C-209ENST00000565511 COL6A1P12109 1028 aa28.46■■■□□ 2.15
RAB40C-209ENST00000565511 SHCBP1Q8NEM2 672 aa28.46■■■□□ 2.15
RAB40C-209ENST00000565511 SH2D4AQ9H788 454 aa28.46■■■□□ 2.15
RAB40C-209ENST00000565511 KANSL2Q9H9L4 492 aa28.46■■■□□ 2.15
RAB40C-209ENST00000565511 ZMYND8Q9ULU4 1186 aaPredicted RBP28.46■■■□□ 2.15
RAB40C-209ENST00000565511 TTC41PQ6P2S7 1318 aa28.45■■■□□ 2.15
RAB40C-209ENST00000565511 PLS1Q14651 629 aa28.45■■■□□ 2.14
RAB40C-209ENST00000565511 TMEM132BQ14DG7 1078 aa28.45■■■□□ 2.14
RAB40C-209ENST00000565511 MFSD14CQ5VZR4 134 aa28.45■■■□□ 2.14
RAB40C-209ENST00000565511 GIMAP6Q6P9H5 292 aa28.45■■■□□ 2.14
RAB40C-209ENST00000565511 FAM83BQ5T0W9 1011 aa28.44■■■□□ 2.14
RAB40C-209ENST00000565511 MB21D1Q8N884 522 aa28.44■■■□□ 2.14
RAB40C-209ENST00000565511 NUP88Q99567 741 aaPredicted RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms