RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 FAM83AQ86UY5 434 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 FOXP4Q8IVH2 680 aaPredicted RBP19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 ZNF274Q96GC6 653 aaPredicted RBP19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 INTS4Q96HW7 963 aaKnown RBP19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 SLKQ9H2G2 1235 aaPredicted RBP19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 TPCN1Q9ULQ1 816 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 NAP1L2Q9ULW6 460 aaPredicted RBP19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 TACC3Q9Y6A5 838 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 ATRNL1Q5VV63 1379 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 CCDC69A6NI79 296 aa19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 TSPY3P0CV98 308 aa19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 TSPY8P0CW00 308 aa19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 APOBRQ0VD83 1088 aa19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 SPRYD3Q8NCJ5 442 aa19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 ZSCAN10Q96SZ4 725 aaPredicted RBP19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 CWC22Q9HCG8 908 aaKnown RBP19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 CSADQ9Y600 493 aa19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 PTCH2Q9Y6C5 1203 aa19.17■□□□□ 0.66
THUMPD1-203ENST00000565248 CCL15-CCL14A0A0B4J2E2 113 aa19.16■□□□□ 0.66
THUMPD1-203ENST00000565248 SMIM22K7EJ46 135 aa19.16■□□□□ 0.66
THUMPD1-203ENST00000565248 EVCP57679 992 aa19.16■□□□□ 0.66
THUMPD1-203ENST00000565248 TFAP4Q01664 338 aa19.16■□□□□ 0.66
THUMPD1-203ENST00000565248 CCL15Q16663 113 aa19.16■□□□□ 0.66
THUMPD1-203ENST00000565248 ME3Q16798 604 aa19.16■□□□□ 0.66
THUMPD1-203ENST00000565248 MS4A4AQ96JQ5 239 aa19.16■□□□□ 0.66
THUMPD1-203ENST00000565248 LARP6Q9BRS8 491 aaKnown RBP19.16■□□□□ 0.66
THUMPD1-203ENST00000565248 OTOFQ9HC10 1997 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 KLF18A0A0U1RQI7 1052 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 DHX16O60231 1041 aaKnown RBP19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 RASA1P20936 1047 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 EVX2Q03828 476 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 GABPAQ06546 454 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 PPP4R3BQ5MIZ7 849 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 SGMS1Q86VZ5 419 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 ZFPM1Q8IX07 1006 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 IGDCC4Q8TDY8 1250 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 TNKSO95271 1327 aa19.15■□□□□ 0.66
THUMPD1-203ENST00000565248 DDTLA6NHG4 134 aaPredicted RBP19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 GOLGA8BA8MQT2 603 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 PFKFB2O60825 505 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 GNRH1P01148 92 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 MAP3K9P80192 1104 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 FAM47AQ5JRC9 791 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 IFIT1BQ5T764 474 aaKnown RBP19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 CCDC83Q8IWF9 413 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 SLC44A5Q8NCS7 719 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 BRI3BPQ8WY22 251 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 CCDC17Q96LX7 622 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 ZKSCAN3Q9BRR0 538 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 LY9Q9HBG7 655 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 TCP11L1Q9NUJ3 509 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 HERC5Q9UII4 1024 aaKnown RBP19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 SLC12A7Q9Y666 1083 aa19.14■□□□□ 0.65
THUMPD1-203ENST00000565248 CEP290O15078 2479 aa19.13■□□□□ 0.65
THUMPD1-203ENST00000565248 H0YGN5 161 aa19.13■□□□□ 0.65
THUMPD1-203ENST00000565248 MYCP01106 439 aaPredicted RBP19.13■□□□□ 0.65
THUMPD1-203ENST00000565248 CAP1Q01518 475 aa19.13■□□□□ 0.65
THUMPD1-203ENST00000565248 STK3Q13188 491 aa19.13■□□□□ 0.65
THUMPD1-203ENST00000565248 NEDD1Q8NHV4 660 aa19.13■□□□□ 0.65
THUMPD1-203ENST00000565248 GTF3C6Q969F1 213 aa19.13■□□□□ 0.65
THUMPD1-203ENST00000565248 GPHNQ9NQX3 736 aaPredicted RBP19.13■□□□□ 0.65
THUMPD1-203ENST00000565248 ZBTB43O43298 467 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 LARGE1O95461 756 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 PDIA3P30101 505 aaKnown RBP19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 RCAN1P53805 252 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 PRMT2P55345 433 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 VGLL4Q14135 290 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 CPLX2Q6PUV4 134 aaKnown RBP19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 SH3BP5LQ7L8J4 393 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 HOOK2Q96ED9 719 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 OTUD5Q96G74 571 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 CIZ1Q9ULV3 898 aaPredicted RBP19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 SMC3Q9UQE7 1217 aa19.12■□□□□ 0.65
THUMPD1-203ENST00000565248 CALM1P0DP23 149 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 CALM2P0DP24 149 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 CALM3P0DP25 149 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 CETPP11597 493 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 SEC23AQ15436 765 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 APOA5Q6Q788 366 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 CATIPQ7Z7H3 387 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 METTL16Q86W50 562 aaKnown RBP19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 DGKHQ86XP1 1220 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 FAM43AQ8N2R8 423 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 ENAHQ8N8S7 591 aaPredicted RBP19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 NECAB1Q8N987 351 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 SH3TC2Q8TF17 1288 aa19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 LLPHQ9BRT6 129 aaKnown RBP19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 ZCCHC17Q9NP64 241 aaKnown RBP19.11■□□□□ 0.65
THUMPD1-203ENST00000565248 PLIN4Q96Q06 1357 aa19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 CPLX1O14810 134 aa19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 TLR2O60603 784 aa19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 SHMT1P34896 483 aa19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 METAP2P50579 478 aaKnown RBP eCLIP19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 LACTBP83111 547 aaPredicted RBP19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 NKX2-3Q8TAU0 364 aa19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 DPF3Q92784 378 aa19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 KAT14Q9H8E8 782 aa19.1■□□□□ 0.65
THUMPD1-203ENST00000565248 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.1■□□□□ 0.653e-6■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms