RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 WASH4PA8MWX3 477 aa6.87□□□□□ -1.31
PALB2-203ENST00000565038 EIF6P56537 245 aaKnown RBP6.87□□□□□ -1.31
PALB2-203ENST00000565038 XP32Q5T750 250 aa6.87□□□□□ -1.31
PALB2-203ENST00000565038 TMEM192Q8IY95 271 aa6.87□□□□□ -1.31
PALB2-203ENST00000565038 DTWD2Q8NBA8 298 aa6.87□□□□□ -1.31
PALB2-203ENST00000565038 RBBP8NLQ8NC74 664 aaPredicted RBP6.87□□□□□ -1.31
PALB2-203ENST00000565038 UBE2FQ969M7 185 aa6.87□□□□□ -1.31
PALB2-203ENST00000565038 VWCEQ96DN2 955 aa6.87□□□□□ -1.31
PALB2-203ENST00000565038 SEC16BQ96JE7 1060 aa6.87□□□□□ -1.31
PALB2-203ENST00000565038 FBXL18Q96ME1 805 aa6.87□□□□□ -1.31
PALB2-203ENST00000565038 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.87□□□□□ -1.31
PALB2-203ENST00000565038 CLEC3AO75596 197 aa6.86□□□□□ -1.31
PALB2-203ENST00000565038 ATF4P18848 351 aaPredicted RBP6.86□□□□□ -1.31
PALB2-203ENST00000565038 IKZF1Q13422 519 aa6.86□□□□□ -1.31
PALB2-203ENST00000565038 ZYXQ15942 572 aaKnown RBP6.86□□□□□ -1.31
PALB2-203ENST00000565038 NBPF12Q5TAG4 269 aaPredicted RBP6.86□□□□□ -1.31
PALB2-203ENST00000565038 ABI1Q8IZP0 508 aa6.86□□□□□ -1.31
PALB2-203ENST00000565038 PIWIL2Q8TC59 973 aaKnown RBP6.86□□□□□ -1.31
PALB2-203ENST00000565038 ASB11Q8WXH4 323 aa6.86□□□□□ -1.31
PALB2-203ENST00000565038 SLC6A18Q96N87 628 aa6.86□□□□□ -1.31
PALB2-203ENST00000565038 TINF2Q9BSI4 451 aa6.86□□□□□ -1.31
PALB2-203ENST00000565038 ASPNQ9BXN1 380 aa6.86□□□□□ -1.31
PALB2-203ENST00000565038 KCNH3Q9ULD8 1083 aa6.86□□□□□ -1.31
PALB2-203ENST00000565038 GUCY2CP25092 1073 aa6.85□□□□□ -1.31
PALB2-203ENST00000565038 CCNFP41002 786 aa6.85□□□□□ -1.31
PALB2-203ENST00000565038 GIPRP48546 466 aa6.85□□□□□ -1.31
PALB2-203ENST00000565038 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
PALB2-203ENST00000565038 PLCL1Q15111 1095 aa6.85□□□□□ -1.31
PALB2-203ENST00000565038 INTS3Q68E01 1043 aaKnown RBP6.85□□□□□ -1.31
PALB2-203ENST00000565038 VPS37DQ86XT2 251 aa6.85□□□□□ -1.31
PALB2-203ENST00000565038 ANAPC16Q96DE5 110 aa6.85□□□□□ -1.31
PALB2-203ENST00000565038 SHDQ96IW2 340 aa6.85□□□□□ -1.31
PALB2-203ENST00000565038 TM9SF2Q99805 663 aa6.85□□□□□ -1.31
PALB2-203ENST00000565038 DUSP15Q9H1R2 295 aaPredicted RBP6.85□□□□□ -1.31
PALB2-203ENST00000565038 SHISA3A0PJX4 238 aa6.84□□□□□ -1.31
PALB2-203ENST00000565038 RNF4P78317 190 aa6.84□□□□□ -1.31
PALB2-203ENST00000565038 ANGEL2Q5VTE6 544 aaKnown RBP6.84□□□□□ -1.31
PALB2-203ENST00000565038 TDRD10Q5VZ19 366 aaKnown RBP6.84□□□□□ -1.31
PALB2-203ENST00000565038 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.31
PALB2-203ENST00000565038 PRDM7Q9NQW5 492 aa6.84□□□□□ -1.31
PALB2-203ENST00000565038 FAM86C1Q9NVL1 165 aa6.84□□□□□ -1.31
PALB2-203ENST00000565038 MRVI1Q9Y6F6 885 aa6.84□□□□□ -1.31
PALB2-203ENST00000565038 FUT4P22083 530 aa6.83□□□□□ -1.32
PALB2-203ENST00000565038 TPP2P29144 1249 aaPredicted RBP6.83□□□□□ -1.32
PALB2-203ENST00000565038 DNAJA1P31689 397 aaKnown RBP6.83□□□□□ -1.32
PALB2-203ENST00000565038 ZP2Q05996 745 aa6.83□□□□□ -1.32
PALB2-203ENST00000565038 SNW1Q13573 536 aaKnown RBP6.83□□□□□ -1.32
PALB2-203ENST00000565038 PPP2R5EQ16537 467 aa6.83□□□□□ -1.32
PALB2-203ENST00000565038 NBPF9Q3BBW0 867 aa6.83□□□□□ -1.32
PALB2-203ENST00000565038 TAB3Q8N5C8 712 aaPredicted RBP6.83□□□□□ -1.32
PALB2-203ENST00000565038 FAM169BQ8N8A8 192 aa6.83□□□□□ -1.32
PALB2-203ENST00000565038 AGBL5Q8NDL9 886 aa6.83□□□□□ -1.32
PALB2-203ENST00000565038 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.83□□□□□ -1.323e-6■■□□□ 13.7
PALB2-203ENST00000565038 MKRN2Q9H000 416 aaKnown RBP6.83□□□□□ -1.32
PALB2-203ENST00000565038 CARS2Q9HA77 564 aaKnown RBP6.83□□□□□ -1.32
PALB2-203ENST00000565038 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
PALB2-203ENST00000565038 SUCOQ9UBS9 1254 aaKnown RBP6.83□□□□□ -1.32
PALB2-203ENST00000565038 C9IYK1 514 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 SSBP05455 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
PALB2-203ENST00000565038 SRFP11831 508 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 TMC3Q7Z5M5 1100 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 THAP5Q7Z6K1 395 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 TTC6Q86TZ1 520 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 CREG2Q8IUH2 290 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 DHRS1Q96LJ7 313 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 GPR62Q9BZJ7 368 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 TRIT1Q9H3H1 467 aaKnown RBP6.82□□□□□ -1.32
PALB2-203ENST00000565038 ADAMTS6Q9UKP5 1117 aa6.82□□□□□ -1.32
PALB2-203ENST00000565038 LTBP3Q9NS15 1303 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 A0A1W2PQH9 124 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 TP53P04637 393 aaPredicted RBP6.81□□□□□ -1.32
PALB2-203ENST00000565038 PMS1P54277 932 aaKnown RBP6.81□□□□□ -1.32
PALB2-203ENST00000565038 ARID5AQ03989 594 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 CLEC16AQ2KHT3 1053 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 PPFIBP1Q86W92 1011 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 CCDC144CPQ8IYA2 1237 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 OR6P1Q8NGX9 317 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 PI4K2BQ8TCG2 481 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 PRDM14Q9GZV8 571 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 STRIP2Q9ULQ0 834 aa6.81□□□□□ -1.32
PALB2-203ENST00000565038 ESR1P03372 595 aa6.8□□□□□ -1.32
PALB2-203ENST00000565038 NMIQ13287 307 aaPredicted RBP6.8□□□□□ -1.32
PALB2-203ENST00000565038 GAB4Q2WGN9 574 aa6.8□□□□□ -1.32
PALB2-203ENST00000565038 ZNF792Q3KQV3 632 aa6.8□□□□□ -1.32
PALB2-203ENST00000565038 TSPYL5Q86VY4 417 aaPredicted RBP6.8□□□□□ -1.32
PALB2-203ENST00000565038 MCF2L2Q86YR7 1114 aa6.8□□□□□ -1.32
PALB2-203ENST00000565038 ASCC2Q9H1I8 757 aaPredicted RBP6.8□□□□□ -1.32
PALB2-203ENST00000565038 MBNL3Q9NUK0 354 aaKnown RBP6.8□□□□□ -1.32
PALB2-203ENST00000565038 ADGRE2Q9UHX3 823 aa6.8□□□□□ -1.32
PALB2-203ENST00000565038 FBXL21Q9UKT6 434 aa6.8□□□□□ -1.32
PALB2-203ENST00000565038 PCDHB10Q9UN67 800 aa6.8□□□□□ -1.32
PALB2-203ENST00000565038 MINPP1Q9UNW1 487 aa6.8□□□□□ -1.32
PALB2-203ENST00000565038 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
PALB2-203ENST00000565038 FGRP09769 529 aa6.79□□□□□ -1.32
PALB2-203ENST00000565038 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
PALB2-203ENST00000565038 AUHQ13825 339 aaKnown RBP6.79□□□□□ -1.32
PALB2-203ENST00000565038 NAALADL2Q58DX5 795 aa6.79□□□□□ -1.32
PALB2-203ENST00000565038 AXDND1Q5T1B0 1012 aaPredicted RBP6.79□□□□□ -1.32
PALB2-203ENST00000565038 DCAF15Q66K64 600 aa6.79□□□□□ -1.32
PALB2-203ENST00000565038 NPM2Q86SE8 214 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms