RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 APAF1O14727 1248 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 RGL2O15211 777 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 GNAI3P08754 354 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 SKIP12755 728 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 CD97P48960 835 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 INHBCP55103 352 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 CKAP4Q07065 602 aaKnown RBP7□□□□□ -1.29
PTPN9-204ENST00000564970 ZNF268Q14587 947 aaPredicted RBP7□□□□□ -1.29
PTPN9-204ENST00000564970 GLE1Q53GS7 698 aaKnown RBP7□□□□□ -1.29
PTPN9-204ENST00000564970 SPECC1Q5M775 1068 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 NUTM2GQ5VZR2 741 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 KLC3Q6P597 504 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 CLEC4GQ6UXB4 293 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 CEP128Q6ZU80 1094 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 ZNF554Q86TJ5 538 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 ITPRIPQ8IWB1 547 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 CCDC146Q8IYE0 955 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 FAM186BQ8IYM0 893 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 SYCP3Q8IZU3 236 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 SYT2Q8N9I0 419 aaPredicted RBP7□□□□□ -1.29
PTPN9-204ENST00000564970 SH3TC2Q8TF17 1288 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 TRIM11Q96F44 468 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 DDX27Q96GQ7 796 aaKnown RBP7□□□□□ -1.29
PTPN9-204ENST00000564970 CATSPER2Q96P56 530 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 BUD13Q9BRD0 619 aaKnown RBP eCLIP7□□□□□ -1.29
PTPN9-204ENST00000564970 OSBPL1AQ9BXW6 950 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 LNPKQ9C0E8 428 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 TAOK3Q9H2K8 898 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 SYNCQ9H7C4 482 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 PARVBQ9HBI1 364 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 CTTNBP2NLQ9P2B4 639 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 PDP2Q9P2J9 529 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 RPL26L1Q9UNX3 145 aaKnown RBP7□□□□□ -1.29
PTPN9-204ENST00000564970 SATB2Q9UPW6 733 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 MTMR7Q9Y216 660 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 CNPY2Q9Y2B0 182 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 NR2E3Q9Y5X4 410 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 COMMD10Q9Y6G5 202 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 COMMD3-BMI1R4GMX3 469 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 ARAP3Q8WWN8 1544 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 NOS1P29475 1434 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 TTC21AQ8NDW8 1320 aa7□□□□□ -1.29
PTPN9-204ENST00000564970 PZPP20742 1482 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 DNMT1P26358 1616 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 TRPM1Q7Z4N2 1603 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 LRRC10BA6NIK2 292 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 IKBKBO14920 756 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 CYP27B1O15528 508 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 ACTN4O43707 911 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 PFDN1O60925 122 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 TBCAO75347 108 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 STK10O94804 968 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 ANP32DO95626 131 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 ALOX15P16050 662 aaPredicted RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 CSE1LP55060 971 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 GNG11P61952 73 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 POU5F1Q01860 360 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 ITIH3Q06033 890 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 PDE4BQ07343 736 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 MYO1EQ12965 1108 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 USP4Q13107 963 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 NDUFA5Q16718 116 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 TRIM71Q2Q1W2 868 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 GNPTABQ3T906 1256 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 CFAP100Q494V2 611 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 BOLA3Q53S33 107 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 RNF187Q5TA31 235 aaPredicted RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 NAA35Q5VZE5 725 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 NCAPH2Q6IBW4 605 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 FAM228AQ86W67 206 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 VPS37AQ8NEZ2 397 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 ANKK1Q8NFD2 765 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 ACMSDQ8TDX5 336 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 CTNNBL1Q8WYA6 563 aaPredicted RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 ATP6V0A1Q93050 837 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 KIFC2Q96AC6 838 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 L3MBTL3Q96JM7 780 aaPredicted RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 SNX27Q96L92 541 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 RTFDC1Q9BY42 306 aaPredicted RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 OXCT2Q9BYC2 517 aaPredicted RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 TANGO6Q9C0B7 1094 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 METTL14Q9HCE5 456 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 RMND1Q9NWS8 449 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 IL1RAPL1Q9NZN1 696 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 CABP1Q9NZU7 370 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 C6orf203Q9P0P8 240 aaPredicted RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 G3BP2Q9UN86 482 aaKnown RBP6.99□□□□□ -1.29
PTPN9-204ENST00000564970 CEP131Q9UPN4 1083 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 SLC30A1Q9Y6M5 507 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 ADGBQ8N7X0 1667 aa6.99□□□□□ -1.29
PTPN9-204ENST00000564970 TMEM247A6NEH6 219 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 C5orf60A6NFR6 353 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 TBKBP1A7MCY6 615 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 FAM25EA8MYX2 175 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 ANKRD65E5RJM6 399 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 STRNO43815 780 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 SMARCA5O60264 1052 aaPredicted RBP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 DIAPH2O60879 1101 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 PPP1R37O75864 691 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms