RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ANAPC15P60006 121 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 USH1GQ495M9 461 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 MSANTD4Q8NCY6 345 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 FAM84BQ96KN1 310 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 BRD1O95696 1058 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 PPP2R5EQ16537 467 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 AOC3Q16853 763 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 PROCA1Q8NCQ7 364 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 ZNF397Q8NF99 534 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 FAM84AQ96KN4 292 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 IBSPP21815 317 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 LMOD1P29536 600 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 DNA2P51530 1060 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 ARHGEF6Q15052 776 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 FILIP1LQ4L180 1135 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 TBC1D7Q9P0N9 293 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 POLLQ9UGP5 575 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 TMEM232C9JQI7 657 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 SF3A1Q15459 793 aaKnown RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 CCDC144BQ3MJ40 725 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 LRRN4CLQ8ND94 238 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 ZSWIM4Q9H7M6 989 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 USP20Q9Y2K6 914 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 JRKLQ9Y4A0 524 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 RPLP2P05387 115 aaKnown RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 GPSM2P81274 684 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 APBA1Q02410 837 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 TRIM22Q8IYM9 498 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 IFNL3Q8IZI9 196 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ZNF396Q96N95 335 aaPredicted RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 TMEM260Q9NX78 707 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 V9GY48 417 aaPredicted RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 MED23Q9ULK4 1368 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 UFL1O94874 794 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 RALYLQ86SE5 291 aaKnown RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 KIRREL3Q8IZU9 778 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 CEP112Q8N8E3 955 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 PCDHB6Q9Y5E3 794 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 NTSR2O95665 410 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ABL1P00519 1130 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 AMPD3Q01432 767 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 JAKMIP2Q96AA8 810 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 GPCPD1Q9NPB8 672 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 RTCBQ9Y3I0 505 aaKnown RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 LOXHD1Q8IVV2 1947 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 MROH7-TTC4A0A0A0MT08 1334 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 TCP10L2B9ZVM9 353 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 GDF11O95390 407 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ATP5JP18859 108 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 CHMP4BP1P59074 171 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 UBE2SQ16763 222 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 IMMTQ16891 758 aaKnown RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 TMEM130Q8N3G9 435 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ISCA1Q9BUE6 129 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.8□□□□□ -1.83e-6■■□□□ 12.1
CHD9-213ENST00000564845 CTAGE5O15320 804 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 KIF11P52732 1056 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 SP4Q02446 784 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 DPCR1Q3MIW9 517 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 AOPEPQ8N6M6 819 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ZNF668Q96K58 619 aaPredicted RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 DONSONQ9NYP3 566 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 COL1A1P02452 1464 aaPredicted RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 PDE8AO60658 829 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 IGHMBP2P38935 993 aaKnown RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 TUBB2AQ13885 445 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 COL23A1Q86Y22 540 aaPredicted RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 LEO1Q8WVC0 666 aaPredicted RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 SPIRE2Q8WWL2 714 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 DPF2Q92785 391 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 TUBB2BQ9BVA1 445 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 MIS12Q9H081 205 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 HPS5Q9UPZ3 1129 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 GOLGA8QA0A0J9YX86 632 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 GOLGA8OA6NCC3 632 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 GSG1L2A8MUP6 293 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 GOLGA8NF8WBI6 632 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 KIF4BQ2VIQ3 1234 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 JAKMIP3Q5VZ66 844 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 KCTD17Q8N5Z5 321 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 PLCG2P16885 1265 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 METAP2P50579 478 aaKnown RBP eCLIP3.8□□□□□ -1.8
CHD9-213ENST00000564845 BIRC2Q13490 618 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ELMSAN1Q6PJG2 1045 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 EP400NLQ6ZTU2 488 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ARFGEF2Q9Y6D5 1785 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 GRM1Q13255 1194 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 CUL5Q93034 780 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 COA7Q96BR5 231 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ALG1Q9BT22 464 aa3.8□□□□□ -1.8
CHD9-213ENST00000564845 ZNF277Q9NRM2 450 aaPredicted RBP3.8□□□□□ -1.8
CHD9-213ENST00000564845 A0A087X0B3 334 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 ZBTB39O15060 712 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 NOC2LQ9Y3T9 749 aaKnown RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 ERVV-2B6SEH9 535 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 CCDC175P0C221 793 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 PCP11498 1178 aaKnown RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 PPP2R5AQ15172 486 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms