RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 MTMR4Q9NYA4 1195 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 PALM3A6NDB9 673 aaPredicted RBP29.07■■■□□ 2.24
LINC01003-201ENST00000564834 AKR1B1P15121 316 aa29.07■■■□□ 2.24
LINC01003-201ENST00000564834 ZNRF3Q9ULT6 936 aa29.07■■■□□ 2.24
LINC01003-201ENST00000564834 COL2A1P02458 1487 aaPredicted RBP29.06■■■□□ 2.24
LINC01003-201ENST00000564834 TCP10Q12799 353 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 RILPL1Q5EBL4 403 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 CCDC73Q6ZRK6 1079 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 CLSTN2Q9H4D0 955 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 PI4KBQ9UBF8 816 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 MYH4Q9Y623 1939 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 KRT2P35908 639 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 NR5A1Q13285 461 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 SGIP1Q9BQI5 828 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 TDRD3Q9H7E2 651 aaKnown RBP29.06■■■□□ 2.24
LINC01003-201ENST00000564834 BRMS1Q9HCU9 246 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 HDAC9Q9UKV0 1011 aa29.06■■■□□ 2.24
LINC01003-201ENST00000564834 PPP6R2O75170 966 aa29.05■■■□□ 2.24
LINC01003-201ENST00000564834 ENTPD3O75355 529 aa29.05■■■□□ 2.24
LINC01003-201ENST00000564834 PTPAQ15257 358 aa29.05■■■□□ 2.24
LINC01003-201ENST00000564834 MAP3K11Q16584 847 aa29.05■■■□□ 2.24
LINC01003-201ENST00000564834 JMYQ8N9B5 988 aa29.05■■■□□ 2.24
LINC01003-201ENST00000564834 OXER1Q8TDS5 423 aa29.05■■■□□ 2.24
LINC01003-201ENST00000564834 CCDC17Q96LX7 622 aa29.05■■■□□ 2.24
LINC01003-201ENST00000564834 TNMDQ9H2S6 317 aa29.05■■■□□ 2.24
LINC01003-201ENST00000564834 DDTLA6NHG4 134 aaPredicted RBP29.04■■■□□ 2.24
LINC01003-201ENST00000564834 MRPS27Q92552 414 aaKnown RBP29.04■■■□□ 2.24
LINC01003-201ENST00000564834 PRMT6Q96LA8 375 aaPredicted RBP29.04■■■□□ 2.24
LINC01003-201ENST00000564834 GOLPH3LQ9H4A5 285 aa29.04■■■□□ 2.24
LINC01003-201ENST00000564834 CD2APQ9Y5K6 639 aa29.04■■■□□ 2.24
LINC01003-201ENST00000564834 ATRNL1Q5VV63 1379 aa29.04■■■□□ 2.24
LINC01003-201ENST00000564834 PARP1P09874 1014 aaKnown RBP29.03■■■□□ 2.24
LINC01003-201ENST00000564834 FAM160A1Q05DH4 1040 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 FSIP1Q8NA03 581 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 FUCA2Q9BTY2 467 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 TAOK3Q9H2K8 898 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 DNAJC18Q9H819 358 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 SH3GLB2Q9NR46 395 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 TTLL1O95922 423 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 RBM43Q6ZSC3 357 aaKnown RBP29.03■■■□□ 2.24
LINC01003-201ENST00000564834 SH3BP5LQ7L8J4 393 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 ZSCAN29Q8IWY8 852 aaPredicted RBP29.03■■■□□ 2.24
LINC01003-201ENST00000564834 OGFOD1Q8N543 542 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 SPZ1Q9BXG8 430 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.03■■■□□ 2.24
LINC01003-201ENST00000564834 MTMR7Q9Y216 660 aa29.03■■■□□ 2.24
LINC01003-201ENST00000564834 SPDYE2BA6NHP3 402 aa29.02■■■□□ 2.24
LINC01003-201ENST00000564834 SPDYE6P0CI01 402 aa29.02■■■□□ 2.24
LINC01003-201ENST00000564834 TOB1P50616 345 aaPredicted RBP29.02■■■□□ 2.24
LINC01003-201ENST00000564834 SNW1Q13573 536 aaKnown RBP29.02■■■□□ 2.24
LINC01003-201ENST00000564834 NPY5RQ15761 445 aa29.02■■■□□ 2.24
LINC01003-201ENST00000564834 PPP4R3BQ5MIZ7 849 aa29.02■■■□□ 2.24
LINC01003-201ENST00000564834 AGBL3Q8NEM8 1001 aa29.02■■■□□ 2.24
LINC01003-201ENST00000564834 ENGASEQ8NFI3 743 aa29.02■■■□□ 2.24
LINC01003-201ENST00000564834 PPP1R1BQ9UD71 204 aaPredicted RBP29.02■■■□□ 2.24
LINC01003-201ENST00000564834 KLRF2D3W0D1 207 aa29.01■■■□□ 2.23
LINC01003-201ENST00000564834 CYTH3O43739 400 aa29.01■■■□□ 2.23
LINC01003-201ENST00000564834 SMARCA1P28370 1054 aa29.01■■■□□ 2.23
LINC01003-201ENST00000564834 CAMK4Q16566 473 aa29.01■■■□□ 2.23
LINC01003-201ENST00000564834 AXDND1Q5T1B0 1012 aaPredicted RBP29.01■■■□□ 2.23
LINC01003-201ENST00000564834 FOXP4Q8IVH2 680 aaPredicted RBP29.01■■■□□ 2.23
LINC01003-201ENST00000564834 SLC35G1Q2M3R5 365 aa29.01■■■□□ 2.23
LINC01003-201ENST00000564834 TMOD2Q9NZR1 351 aa29.01■■■□□ 2.23
LINC01003-201ENST00000564834 METTL16Q86W50 562 aaKnown RBP29■■■□□ 2.23
LINC01003-201ENST00000564834 PIBF1Q8WXW3 757 aa29■■■□□ 2.23
LINC01003-201ENST00000564834 PDHBP11177 359 aa28.99■■■□□ 2.23
LINC01003-201ENST00000564834 MARCKSP29966 332 aaPredicted RBP28.99■■■□□ 2.23
LINC01003-201ENST00000564834 DLGAP5Q15398 846 aa28.99■■■□□ 2.23
LINC01003-201ENST00000564834 FAM177A1Q8N128 213 aaPredicted RBP28.99■■■□□ 2.23
LINC01003-201ENST00000564834 TRIM34Q9BYJ4 488 aa28.99■■■□□ 2.23
LINC01003-201ENST00000564834 CABP5Q9NP86 173 aa28.99■■■□□ 2.23
LINC01003-201ENST00000564834 ZBTB12Q9Y330 459 aaPredicted RBP28.99■■■□□ 2.23
LINC01003-201ENST00000564834 GOLGA8HP0CJ92 632 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 CCDC192P0DO97 292 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 CALML3P27482 149 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 NLRP5P59047 1200 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 USP17L2Q6R6M4 530 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 RASGRP2Q7LDG7 609 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 TNFRSF25Q93038 417 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 MPHOSPH10O00566 681 aaKnown RBP28.98■■■□□ 2.23
LINC01003-201ENST00000564834 CTAGE5O15320 804 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 KINO60870 393 aaKnown RBP28.98■■■□□ 2.23
LINC01003-201ENST00000564834 SNHG28P0DPA3 235 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 VEGFAP15692 232 aaPredicted RBP28.98■■■□□ 2.23
LINC01003-201ENST00000564834 CMA1P23946 247 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 TATDN1Q6P1N9 297 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 FMR1NBQ8N0W7 255 aaPredicted RBP28.98■■■□□ 2.23
LINC01003-201ENST00000564834 JDP2Q8WYK2 163 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 CLIP2Q9UDT6 1046 aa28.98■■■□□ 2.23
LINC01003-201ENST00000564834 CXCL9Q07325 125 aa28.97■■■□□ 2.23
LINC01003-201ENST00000564834 ASPRV1Q53RT3 343 aa28.97■■■□□ 2.23
LINC01003-201ENST00000564834 LRRC47Q8N1G4 583 aaKnown RBP28.97■■■□□ 2.23
LINC01003-201ENST00000564834 MTMR14Q8NCE2 650 aa28.97■■■□□ 2.23
LINC01003-201ENST00000564834 CEP131Q9UPN4 1083 aa28.97■■■□□ 2.23
LINC01003-201ENST00000564834 USP17L5A8MUK1 530 aa28.96■■■□□ 2.23
LINC01003-201ENST00000564834 NFKBIEO00221 500 aa28.96■■■□□ 2.23
LINC01003-201ENST00000564834 CERKLQ49MI3 558 aaPredicted RBP28.96■■■□□ 2.23
LINC01003-201ENST00000564834 ANP32BQ92688 251 aaKnown RBP28.96■■■□□ 2.23
LINC01003-201ENST00000564834 ARFGEF1Q9Y6D6 1849 aa28.96■■■□□ 2.23
LINC01003-201ENST00000564834 A0A1B0GVL5 298 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms