RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 CUL4BQ13620 913 aa17.39■□□□□ 0.37
HERC2-207ENST00000564734 SPECC1LQ69YQ0 1117 aa17.39■□□□□ 0.37
HERC2-207ENST00000564734 SYMPKQ92797 1274 aaKnown RBP17.39■□□□□ 0.37
HERC2-207ENST00000564734 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.39■□□□□ 0.373e-7■■■□□ 16.5
HERC2-207ENST00000564734 A0A1B0GTH6 734 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 ZBTB22O15209 634 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 DPYDQ12882 1025 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 FAM53CQ9NYF3 392 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 VWA3AA6NCI4 1184 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 CD44P16070 742 aaKnown RBP17.38■□□□□ 0.37
HERC2-207ENST00000564734 CNTNAP4Q9C0A0 1308 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 STX10O60499 249 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 NMT2O60551 498 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 ATP2C1P98194 919 aaPredicted RBP17.38■□□□□ 0.37
HERC2-207ENST00000564734 DMTNQ08495 405 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 SBK1Q52WX2 424 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 FBXO38Q6PIJ6 1188 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 PPP2R2CQ9Y2T4 447 aa17.38■□□□□ 0.37
HERC2-207ENST00000564734 CDK11BP21127 795 aaKnown RBP17.37■□□□□ 0.37
HERC2-207ENST00000564734 RPS8P62241 208 aaKnown RBP17.37■□□□□ 0.37
HERC2-207ENST00000564734 TTC38Q5R3I4 469 aa17.37■□□□□ 0.37
HERC2-207ENST00000564734 HOMER1Q86YM7 354 aa17.37■□□□□ 0.37
HERC2-207ENST00000564734 BAG1Q99933 345 aaPredicted RBP17.37■□□□□ 0.37
HERC2-207ENST00000564734 DNAI1Q9UI46 699 aa17.37■□□□□ 0.37
HERC2-207ENST00000564734 IRS2Q9Y4H2 1338 aa17.37■□□□□ 0.37
HERC2-207ENST00000564734 ZNF174Q15697 407 aa17.37■□□□□ 0.37
HERC2-207ENST00000564734 UTP14CQ5TAP6 766 aaKnown RBP17.37■□□□□ 0.37
HERC2-207ENST00000564734 ATP8A2Q9NTI2 1148 aa17.37■□□□□ 0.37
HERC2-207ENST00000564734 LAMB1P07942 1786 aa17.37■□□□□ 0.37
HERC2-207ENST00000564734 KIAA1551Q9HCM1 1747 aa17.37■□□□□ 0.37
HERC2-207ENST00000564734 ZSCAN12O43309 604 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 SPATA1Q5VX52 437 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 BICDL1Q6ZP65 573 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 GSDMAQ96QA5 445 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 BRMS1Q9HCU9 246 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 HIBADHP31937 336 aaKnown RBP17.36■□□□□ 0.37
HERC2-207ENST00000564734 SMIM5Q71RC9 77 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 CRNKL1Q9BZJ0 848 aaKnown RBP17.36■□□□□ 0.37
HERC2-207ENST00000564734 PPP1R3GB7ZBB8 358 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 CYP2D6P10635 497 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 H2AFXP16104 143 aaPredicted RBP17.36■□□□□ 0.37
HERC2-207ENST00000564734 CASP1P29466 404 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 AFMP43652 599 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 E2F4Q16254 413 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 FAM47AQ5JRC9 791 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 CDKAL1Q5VV42 579 aa17.36■□□□□ 0.37
HERC2-207ENST00000564734 ADAMTS3O15072 1205 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 PBX1P40424 430 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 ADKP55263 362 aaKnown RBP17.35■□□□□ 0.37
HERC2-207ENST00000564734 RCSD1Q6JBY9 416 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 TMED8Q6PL24 325 aaPredicted RBP17.35■□□□□ 0.37
HERC2-207ENST00000564734 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 SCG2P13521 617 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 VEGFAP15692 232 aaPredicted RBP17.35■□□□□ 0.37
HERC2-207ENST00000564734 PRDX5P30044 214 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 PTGDRQ13258 359 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 IL17AQ16552 155 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 PFKFB3Q16875 520 aaPredicted RBP17.35■□□□□ 0.37
HERC2-207ENST00000564734 ERCC6LQ2NKX8 1250 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 CTCFLQ8NI51 663 aaPredicted RBP17.35■□□□□ 0.37
HERC2-207ENST00000564734 CCDC34Q96HJ3 373 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 ANKRD2Q9GZV1 360 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 ARPP21Q9UBL0 812 aaPredicted RBP17.35■□□□□ 0.37
HERC2-207ENST00000564734 MAST2Q6P0Q8 1798 aa17.35■□□□□ 0.37
HERC2-207ENST00000564734 TRAPPC10P48553 1259 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 NARFQ9UHQ1 456 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 FAM196AQ6ZSG2 479 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 TOGARAM2Q6ZUX3 1019 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 NYXQ9GZU5 481 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 XDHP47989 1333 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 TEX33O43247 280 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 TM4SF1P30408 202 aa17.34■□□□□ 0.37
HERC2-207ENST00000564734 GTPBP4Q9BZE4 634 aaKnown RBP17.34■□□□□ 0.37
HERC2-207ENST00000564734 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
HERC2-207ENST00000564734 GTF2E1P29083 439 aaPredicted RBP17.33■□□□□ 0.37
HERC2-207ENST00000564734 PDXDC2PQ6P474 469 aa17.33■□□□□ 0.37
HERC2-207ENST00000564734 NLRP3Q96P20 1036 aa17.33■□□□□ 0.37
HERC2-207ENST00000564734 ZNF446Q9NWS9 450 aa17.33■□□□□ 0.37
HERC2-207ENST00000564734 ADD3Q9UEY8 706 aaKnown RBP17.33■□□□□ 0.37
HERC2-207ENST00000564734 ONECUT3O60422 494 aaPredicted RBP17.33■□□□□ 0.36
HERC2-207ENST00000564734 RC3H1Q5TC82 1133 aaKnown RBP17.33■□□□□ 0.36
HERC2-207ENST00000564734 TXNRD3Q86VQ6 643 aa17.33■□□□□ 0.36
HERC2-207ENST00000564734 SYNRGQ9UMZ2 1314 aa17.33■□□□□ 0.36
HERC2-207ENST00000564734 GOLGA6L9A6NEM1 432 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 C4orf32Q8N8J7 132 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 PANX2Q96RD6 677 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 MTRQ99707 1265 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 SRRTQ9BXP5 876 aaKnown RBP17.32■□□□□ 0.36
HERC2-207ENST00000564734 SRP68Q9UHB9 627 aaKnown RBP17.32■□□□□ 0.36
HERC2-207ENST00000564734 NLRP5P59047 1200 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 PIK3AP1Q6ZUJ8 805 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 ANKS1AQ92625 1134 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 MYH13Q9UKX3 1938 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 RPS6KA4O75676 772 aa17.32■□□□□ 0.36
HERC2-207ENST00000564734 STX17P56962 302 aa17.31■□□□□ 0.36
HERC2-207ENST00000564734 SMYD4Q8IYR2 804 aaPredicted RBP17.31■□□□□ 0.36
HERC2-207ENST00000564734 AKR1B15C9JRZ8 316 aaPredicted RBP17.31■□□□□ 0.36
HERC2-207ENST00000564734 SETDB2Q96T68 719 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms