RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CYP2C8P10632 490 aa18.85■□□□□ 0.61
RAB40C-208ENST00000564703 DGKZQ13574 1117 aa18.85■□□□□ 0.61
RAB40C-208ENST00000564703 NOM1Q5C9Z4 860 aaKnown RBP18.85■□□□□ 0.61
RAB40C-208ENST00000564703 MKL1Q969V6 931 aa18.85■□□□□ 0.61
RAB40C-208ENST00000564703 NBPF3Q9H094 633 aa18.85■□□□□ 0.61
RAB40C-208ENST00000564703 PRDM10Q9NQV6 1147 aa18.85■□□□□ 0.61
RAB40C-208ENST00000564703 TACC3Q9Y6A5 838 aa18.85■□□□□ 0.61
RAB40C-208ENST00000564703 B4E1Z4 1266 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 FKTNO75072 461 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 KDM4AO75164 1064 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
RAB40C-208ENST00000564703 SPICE1Q8N0Z3 855 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 TTC14Q96N46 770 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 ASCC2Q9H1I8 757 aaPredicted RBP18.84■□□□□ 0.61
RAB40C-208ENST00000564703 R3HDMLQ9H3Y0 253 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 SYNPO2Q9UMS6 1093 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 PTPRFP10586 1907 aa18.84■□□□□ 0.61
RAB40C-208ENST00000564703 PLIN4Q96Q06 1357 aa18.83■□□□□ 0.61
RAB40C-208ENST00000564703 F5H6K3 240 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 VCAM1P19320 739 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 SP3Q02447 781 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 KLRC3Q07444 240 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 KIF22Q14807 665 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 ARHGEF6Q15052 776 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 CATSPERGQ6ZRH7 1159 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 TANGO6Q9C0B7 1094 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 RPAP3Q9H6T3 665 aaPredicted RBP18.83■□□□□ 0.6
RAB40C-208ENST00000564703 IL17RBQ9NRM6 502 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 HOXC10Q9NYD6 342 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 ZSWIM5Q9P217 1185 aa18.83■□□□□ 0.6
RAB40C-208ENST00000564703 NEDD4P46934 1319 aa18.82■□□□□ 0.6
RAB40C-208ENST00000564703 E7EWF7 191 aa18.82■□□□□ 0.6
RAB40C-208ENST00000564703 NMT2O60551 498 aa18.82■□□□□ 0.6
RAB40C-208ENST00000564703 ZKSCAN1P17029 563 aaPredicted RBP18.82■□□□□ 0.6
RAB40C-208ENST00000564703 GCLCP48506 637 aaPredicted RBP18.82■□□□□ 0.6
RAB40C-208ENST00000564703 COG2Q14746 738 aa18.82■□□□□ 0.6
RAB40C-208ENST00000564703 NECTIN1Q15223 517 aa18.82■□□□□ 0.6
RAB40C-208ENST00000564703 ZNF296Q8WUU4 475 aaPredicted RBP18.82■□□□□ 0.6
RAB40C-208ENST00000564703 P2RX7Q99572 595 aaKnown RBP18.82■□□□□ 0.6
RAB40C-208ENST00000564703 UBAC1Q9BSL1 405 aa18.82■□□□□ 0.6
RAB40C-208ENST00000564703 CPA4Q9UI42 421 aa18.82■□□□□ 0.6
RAB40C-208ENST00000564703 SLC27A2O14975 620 aa18.81■□□□□ 0.6
RAB40C-208ENST00000564703 WDR46O15213 610 aaKnown RBP18.81■□□□□ 0.6
RAB40C-208ENST00000564703 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
RAB40C-208ENST00000564703 DGKHQ86XP1 1220 aa18.81■□□□□ 0.6
RAB40C-208ENST00000564703 GTF3C2Q8WUA4 911 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-208ENST00000564703 ERO1AQ96HE7 468 aa18.81■□□□□ 0.6
RAB40C-208ENST00000564703 ZKSCAN3Q9BRR0 538 aa18.81■□□□□ 0.6
RAB40C-208ENST00000564703 ISY1Q9ULR0 285 aaKnown RBP18.81■□□□□ 0.6
RAB40C-208ENST00000564703 ERICH2A1L162 156 aa18.8■□□□□ 0.6
RAB40C-208ENST00000564703 TOP1P11387 765 aaKnown RBP18.8■□□□□ 0.6
RAB40C-208ENST00000564703 SART3Q15020 963 aaKnown RBP18.8■□□□□ 0.6
RAB40C-208ENST00000564703 SLFN13Q68D06 897 aa18.8■□□□□ 0.6
RAB40C-208ENST00000564703 C17orf99Q6UX52 265 aa18.8■□□□□ 0.6
RAB40C-208ENST00000564703 LRRC47Q8N1G4 583 aaKnown RBP18.8■□□□□ 0.6
RAB40C-208ENST00000564703 GMCL1P1Q8NEA9 526 aa18.8■□□□□ 0.6
RAB40C-208ENST00000564703 ZSCAN10Q96SZ4 725 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-208ENST00000564703 CASP8AP2Q9UKL3 1982 aa18.79■□□□□ 0.6
RAB40C-208ENST00000564703 FLOT1O75955 427 aa18.79■□□□□ 0.6
RAB40C-208ENST00000564703 HERVK_113P62684 666 aa18.79■□□□□ 0.6
RAB40C-208ENST00000564703 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
RAB40C-208ENST00000564703 ANKRD13CQ8N6S4 541 aa18.79■□□□□ 0.6
RAB40C-208ENST00000564703 EPB41L2O43491 1005 aaKnown RBP18.78■□□□□ 0.6
RAB40C-208ENST00000564703 NDUFB10O96000 172 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 SLC1A4P43007 532 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 KRT32Q14532 448 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 KIAA1755Q5JYT7 1200 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 FAM83BQ5T0W9 1011 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 CCAR1Q8IX12 1150 aaKnown RBP18.78■□□□□ 0.6
RAB40C-208ENST00000564703 TMEM47Q9BQJ4 181 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 KAT14Q9H8E8 782 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 MTMR7Q9Y216 660 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 LAMA4Q16363 1823 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 MYH4Q9Y623 1939 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 LOC285556D6RIA3 1793 aa18.78■□□□□ 0.6
RAB40C-208ENST00000564703 GREB1LQ9C091 1923 aaPredicted RBP18.77■□□□□ 0.6
RAB40C-208ENST00000564703 BMP3P12645 472 aa18.77■□□□□ 0.6
RAB40C-208ENST00000564703 MCCP23508 829 aa18.77■□□□□ 0.6
RAB40C-208ENST00000564703 NOVP48745 357 aa18.77■□□□□ 0.6
RAB40C-208ENST00000564703 GPRC5AQ8NFJ5 357 aa18.77■□□□□ 0.6
RAB40C-208ENST00000564703 CTDP1Q9Y5B0 961 aaPredicted RBP18.77■□□□□ 0.6
RAB40C-208ENST00000564703 IFIT3O14879 490 aaKnown RBP18.76■□□□□ 0.59
RAB40C-208ENST00000564703 BCRP11274 1271 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 MCM5P33992 734 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 IKQ13123 557 aaPredicted RBP18.76■□□□□ 0.59
RAB40C-208ENST00000564703 FAM110CQ1W6H9 321 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 IFIT1BQ5T764 474 aaKnown RBP18.76■□□□□ 0.59
RAB40C-208ENST00000564703 RCSD1Q6JBY9 416 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 CHURC1Q8WUH1 139 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 CHMP4CQ96CF2 233 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 PAGR1Q9BTK6 254 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 RABGAP1Q9Y3P9 1069 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 PCNTO95613 3336 aa18.76■□□□□ 0.59
RAB40C-208ENST00000564703 TNKSO95271 1327 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 FMNL1O95466 1100 aaPredicted RBP18.75■□□□□ 0.59
RAB40C-208ENST00000564703 HOXD10P28358 340 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 DSG3P32926 999 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 HSPA4P34932 840 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms