RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 RANBP6O60518 1105 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 OFD1O75665 1012 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 SLC3A2P08195 630 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 CALM1P0DP23 149 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 CALM2P0DP24 149 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 CALM3P0DP25 149 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 ATP2B4P23634 1241 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 MECOMQ03112 1051 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 GNL2Q13823 731 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 SEC23AQ15436 765 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 STX1AQ16623 288 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 SLC27A3Q5K4L6 730 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 FAM196AQ6ZSG2 479 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 CRACR2BQ8N4Y2 399 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 WDR66Q8TBY9 1149 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 PHKBQ93100 1093 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 TIGD1Q96MW7 591 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 GOLPH3LQ9H4A5 285 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 ANO10Q9NW15 660 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 MYH13Q9UKX3 1938 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
HERPUD1-209ENST00000564678 FAM237AA0A1B0GTK4 181 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 WTIPA6NIX2 430 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 ORC4O43929 436 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 CD46P15529 392 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 RXRAP19793 462 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 TERF1P54274 439 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 KIAA2012Q0VF49 1180 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 NFIXQ14938 502 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 TCEAL1Q15170 157 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 AXDND1Q5T1B0 1012 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 CTR9Q6PD62 1173 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 SMIM5Q71RC9 77 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 SEPT12Q8IYM1 358 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 ZNF654Q8IZM8 581 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 ZNF384Q8TF68 577 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 ZSCAN10Q96SZ4 725 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 SDF4Q9BRK5 362 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 SLC26A6Q9BXS9 759 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 RNF26Q9BY78 433 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 FOXP1Q9H334 677 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 RBM28Q9NW13 759 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 TNKSO95271 1327 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 XDHP47989 1333 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 AFF2P51816 1311 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L3A6NCW0 530 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L4A6NCW7 530 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 H3BRB1 525 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 MMP1P03956 469 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 XBP1P17861 261 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 MRPL58Q14197 206 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L1Q7RTZ2 530 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 NBPF11Q86T75 865 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 NT5DC4Q86YG4 428 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 ELOA2Q8IYF1 753 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 NAT10Q9H0A0 1025 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 TUT1Q9H6E5 874 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 GJB4Q9NTQ9 266 aa8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 ARPP21Q9UBL0 812 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 MORC2Q9Y6X9 1032 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-209ENST00000564678 A0A0U1RQG5 324 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L10C9JJH3 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L12C9JPN9 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L21D6R901 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 ABL1P00519 1130 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 MAPK1P28482 360 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 RBM6P78332 1123 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 GSTO1P78417 241 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 IQCB1Q15051 598 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 PTPAQ15257 358 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 PTPROQ16827 1216 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 CRY2Q49AN0 593 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 RILPL1Q5EBL4 403 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 FAM182BQ5T319 152 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 SARM1Q6SZW1 724 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 CATIPQ7Z7H3 387 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 LUZP1Q86V48 1076 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 METTL16Q86W50 562 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 AMIGO3Q86WK7 504 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 NOSTRINQ8IVI9 506 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 CCDC144CPQ8IYA2 1237 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 AIFM3Q96NN9 605 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 MAP3K14Q99558 947 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 ZKSCAN3Q9BRR0 538 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 MYL10Q9BUA6 226 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 DNAJC25Q9H1X3 360 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms