RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 NMIQ13287 307 aaPredicted RBP21.85■■□□□ 1.09
SYNGR3-204ENST00000564642 TANGO6Q9C0B7 1094 aa21.85■■□□□ 1.09
SYNGR3-204ENST00000564642 VCPKMTQ9H867 229 aa21.85■■□□□ 1.09
SYNGR3-204ENST00000564642 BIN2Q9UBW5 565 aaPredicted RBP21.85■■□□□ 1.09
SYNGR3-204ENST00000564642 PEX10O60683 326 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 PRDM1O75626 825 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 MYCP01106 439 aaPredicted RBP21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 ERVK-9P63128 1117 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 ERVK-24P63145 666 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 COG2Q14746 738 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 Q3C1V9 767 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 SLAIN1Q8ND83 568 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 HOXC10Q9NYD6 342 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 RABGAP1Q9Y3P9 1069 aa21.84■■□□□ 1.09
SYNGR3-204ENST00000564642 RAD21O60216 631 aa21.83■■□□□ 1.09
SYNGR3-204ENST00000564642 MFAP1P55081 439 aaKnown RBP21.83■■□□□ 1.09
SYNGR3-204ENST00000564642 VPS53Q5VIR6 699 aa21.83■■□□□ 1.09
SYNGR3-204ENST00000564642 SPICE1Q8N0Z3 855 aa21.83■■□□□ 1.09
SYNGR3-204ENST00000564642 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.83■■□□□ 1.09
SYNGR3-204ENST00000564642 GOPCQ9HD26 462 aa21.83■■□□□ 1.09
SYNGR3-204ENST00000564642 GREB1LQ9C091 1923 aaPredicted RBP21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 HIP1O00291 1037 aa21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 ADCY3O60266 1144 aa21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 MAPK4P31152 587 aa21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 UBXN2AP68543 259 aa21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 CCNA1P78396 465 aa21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 IRF5Q13568 498 aa21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 KIAA1755Q5JYT7 1200 aa21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 CWC22Q9HCG8 908 aaKnown RBP21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 DIAPH3Q9NSV4 1193 aa21.82■■□□□ 1.08
SYNGR3-204ENST00000564642 POTEFA5A3E0 1075 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 SPDYE16A6NNV3 312 aaPredicted RBP21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 WDR46O15213 610 aaKnown RBP21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 FOXP2O15409 715 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 TSPY3P0CV98 308 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 TSPY8P0CW00 308 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 PDE4AP27815 886 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 ALX1Q15699 326 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 LBX2Q6XYB7 198 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 PXYLP1Q8TE99 480 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 NYAP2Q9P242 653 aa21.81■■□□□ 1.08
SYNGR3-204ENST00000564642 CCDC171Q6TFL3 1326 aa21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 MYH4Q9Y623 1939 aa21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 RBBP6Q7Z6E9 1792 aaKnown RBP21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 HSPD1P10809 573 aaKnown RBP21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 CTDSPL2Q05D32 466 aa21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 POTEEQ6S8J3 1075 aa21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 CWC27Q6UX04 472 aaKnown RBP21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 ZNF589Q86UQ0 364 aaPredicted RBP21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 CLIP2Q9UDT6 1046 aa21.8■■□□□ 1.08
SYNGR3-204ENST00000564642 CNMDO75829 334 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 FLOT1O75955 427 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 FGAP02671 866 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 TFAP4Q01664 338 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 FAM47AQ5JRC9 791 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 SAMD1Q6SPF0 538 aaPredicted RBP21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 NEDD1Q8NHV4 660 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 NUDT12Q9BQG2 462 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 PORCNQ9H237 461 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 ANAPC4Q9UJX5 808 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 GJD2Q9UKL4 321 aa21.79■■□□□ 1.08
SYNGR3-204ENST00000564642 HTTP42858 3142 aa21.78■■□□□ 1.08
SYNGR3-204ENST00000564642 ELNP15502 786 aa21.78■■□□□ 1.08
SYNGR3-204ENST00000564642 TTC22Q5TAA0 569 aa21.78■■□□□ 1.08
SYNGR3-204ENST00000564642 WDR78Q5VTH9 848 aa21.78■■□□□ 1.08
SYNGR3-204ENST00000564642 PLEKHH3Q7Z736 793 aa21.78■■□□□ 1.08
SYNGR3-204ENST00000564642 CEP95Q96GE4 821 aa21.78■■□□□ 1.08
SYNGR3-204ENST00000564642 MTMR4Q9NYA4 1195 aa21.78■■□□□ 1.08
SYNGR3-204ENST00000564642 BTBD7Q9P203 1132 aa21.78■■□□□ 1.08
SYNGR3-204ENST00000564642 IGKV6D-41A0A0C4DH26 115 aa21.77■■□□□ 1.08
SYNGR3-204ENST00000564642 TSPY2A6NKD2 308 aa21.77■■□□□ 1.08
SYNGR3-204ENST00000564642 TTLL1O95922 423 aa21.77■■□□□ 1.08
SYNGR3-204ENST00000564642 EN2P19622 333 aaPredicted RBP21.77■■□□□ 1.08
SYNGR3-204ENST00000564642 DSG3P32926 999 aa21.77■■□□□ 1.08
SYNGR3-204ENST00000564642 MTFR1Q15390 333 aa21.77■■□□□ 1.08
SYNGR3-204ENST00000564642 GPR142Q7Z601 462 aa21.77■■□□□ 1.08
SYNGR3-204ENST00000564642 SOCS4Q8WXH5 440 aa21.77■■□□□ 1.08
SYNGR3-204ENST00000564642 RLFQ13129 1914 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 PLXNB2O15031 1838 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 F5H6K3 240 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 CYP2B6P20813 491 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 KLRC3Q07444 240 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 MB21D1Q8N884 522 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 MKL1Q969V6 931 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 RNF208Q9H0X6 261 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 INCENPQ9NQS7 918 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 TOMM22Q9NS69 142 aa21.76■■□□□ 1.07
SYNGR3-204ENST00000564642 PLIN4Q96Q06 1357 aa21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 RANBP6O60518 1105 aaKnown RBP21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 INHAP05111 366 aa21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 CCL5P13501 91 aa21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 PPP4R3BQ5MIZ7 849 aa21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 FAM83BQ5T0W9 1011 aa21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 IVNS1ABPQ9Y6Y0 642 aa21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 PARP14Q460N5 1801 aa21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 ZMYM6O95789 1325 aa21.75■■□□□ 1.07
SYNGR3-204ENST00000564642 PLS1Q14651 629 aa21.74■■□□□ 1.07
SYNGR3-204ENST00000564642 ATG4CQ96DT6 458 aa21.74■■□□□ 1.07
SYNGR3-204ENST00000564642 SPATC1LQ9H0A9 340 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms