RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 EGR3Q06889 387 aa7.65□□□□□ -1.18
CHD9-212ENST00000564641 RALGPS1Q5JS13 557 aa7.65□□□□□ -1.18
CHD9-212ENST00000564641 PDZD8Q8NEN9 1154 aa7.65□□□□□ -1.18
CHD9-212ENST00000564641 ASCC2Q9H1I8 757 aaPredicted RBP7.65□□□□□ -1.18
CHD9-212ENST00000564641 RBM47A0AV96 593 aaKnown RBP7.64□□□□□ -1.19
CHD9-212ENST00000564641 RGS13O14921 159 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 GREM1O60565 184 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 ATE1O95260 518 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 RAP1GAPP47736 663 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 HK2P52789 917 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 KRTAP19-4Q3LI73 84 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 FBXL19Q6PCT2 694 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 LILRA2Q8N149 483 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 FBXO15Q8NCQ5 510 aaPredicted RBP7.64□□□□□ -1.19
CHD9-212ENST00000564641 BAHD1Q8TBE0 780 aaPredicted RBP7.64□□□□□ -1.19
CHD9-212ENST00000564641 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.64□□□□□ -1.19
CHD9-212ENST00000564641 ADAMTS10Q9H324 1103 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 GMIPQ9P107 970 aa7.64□□□□□ -1.19
CHD9-212ENST00000564641 FITM1A5D6W6 292 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 RAD51AP2Q09MP3 1159 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 DUSP4Q13115 394 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 MRPL58Q14197 206 aaKnown RBP7.63□□□□□ -1.19
CHD9-212ENST00000564641 CLEC16AQ2KHT3 1053 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 PRR23BQ6ZRT6 265 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 SPPL2CQ8IUH8 684 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 GIPC2Q8TF65 315 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 TOX2Q96NM4 488 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 GGT7Q9UJ14 662 aa7.63□□□□□ -1.19
CHD9-212ENST00000564641 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
CHD9-212ENST00000564641 WASH4PA8MWX3 477 aa7.62□□□□□ -1.19
CHD9-212ENST00000564641 RAG1P15918 1043 aa7.62□□□□□ -1.19
CHD9-212ENST00000564641 CCNFP41002 786 aa7.62□□□□□ -1.19
CHD9-212ENST00000564641 NR0B2Q15466 257 aa7.62□□□□□ -1.19
CHD9-212ENST00000564641 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
CHD9-212ENST00000564641 ZNF296Q8WUU4 475 aaPredicted RBP7.62□□□□□ -1.19
CHD9-212ENST00000564641 KIF2CQ99661 725 aa7.62□□□□□ -1.19
CHD9-212ENST00000564641 NSUN3Q9H649 340 aaKnown RBP7.62□□□□□ -1.19
CHD9-212ENST00000564641 PCDHB14Q9Y5E9 798 aa7.62□□□□□ -1.19
CHD9-212ENST00000564641 SLC22A31A6NKX4 558 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 LRRN2O75325 713 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 ZGLP1P0C6A0 271 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 CHRNEQ04844 493 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 SYDE1Q6ZW31 735 aaPredicted RBP7.61□□□□□ -1.19
CHD9-212ENST00000564641 REXO1Q8N1G1 1221 aaKnown RBP7.61□□□□□ -1.19
CHD9-212ENST00000564641 VWCEQ96DN2 955 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 EPB41L4BQ9H329 900 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 EHMT1Q9H9B1 1298 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 BRMS1Q9HCU9 246 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 DCP1AQ9NPI6 582 aaPredicted RBP7.61□□□□□ -1.19
CHD9-212ENST00000564641 COPRSQ9NQ92 184 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 PCDHA11Q9Y5I1 949 aa7.61□□□□□ -1.19
CHD9-212ENST00000564641 NFIBO00712 420 aa7.6□□□□□ -1.19
CHD9-212ENST00000564641 TLR3O15455 904 aaKnown RBP7.6□□□□□ -1.19
CHD9-212ENST00000564641 DNAJA2O60884 412 aa7.6□□□□□ -1.19
CHD9-212ENST00000564641 SNX17Q15036 470 aa7.6□□□□□ -1.19
CHD9-212ENST00000564641 LRRFIP1Q32MZ4 808 aaKnown RBP7.6□□□□□ -1.19
CHD9-212ENST00000564641 CDCP2Q5VXM1 449 aa7.6□□□□□ -1.19
CHD9-212ENST00000564641 ANKLE2Q86XL3 938 aa7.6□□□□□ -1.19
CHD9-212ENST00000564641 DIRC2Q96SL1 478 aa7.6□□□□□ -1.19
CHD9-212ENST00000564641 CWC22Q9HCG8 908 aaKnown RBP7.6□□□□□ -1.19
CHD9-212ENST00000564641 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.19
CHD9-212ENST00000564641 ARSHQ5FYA8 562 aa7.59□□□□□ -1.19
CHD9-212ENST00000564641 RNF111Q6ZNA4 994 aa7.59□□□□□ -1.19
CHD9-212ENST00000564641 ANKS4BQ8N8V4 417 aa7.59□□□□□ -1.19
CHD9-212ENST00000564641 ZSCAN18Q8TBC5 510 aaPredicted RBP7.59□□□□□ -1.19
CHD9-212ENST00000564641 SYTL5Q8TDW5 730 aaPredicted RBP7.59□□□□□ -1.19
CHD9-212ENST00000564641 SLC26A8Q96RN1 970 aa7.59□□□□□ -1.19
CHD9-212ENST00000564641 SLC6A17Q9H1V8 727 aa7.59□□□□□ -1.19
CHD9-212ENST00000564641 TMEM253P0C7T8 217 aa7.58□□□□□ -1.2
CHD9-212ENST00000564641 ZNF165P49910 485 aa7.58□□□□□ -1.2
CHD9-212ENST00000564641 ERVFC1P60507 584 aa7.58□□□□□ -1.2
CHD9-212ENST00000564641 APOBRQ0VD83 1088 aa7.58□□□□□ -1.2
CHD9-212ENST00000564641 IRF2BP1Q8IU81 584 aa7.58□□□□□ -1.2
CHD9-212ENST00000564641 ZNF655Q8N720 491 aaPredicted RBP7.58□□□□□ -1.2
CHD9-212ENST00000564641 DAGLBQ8NCG7 672 aa7.58□□□□□ -1.2
CHD9-212ENST00000564641 ARID1BQ8NFD5 2236 aaPredicted RBP7.58□□□□□ -1.2
CHD9-212ENST00000564641 UBOX5O94941 541 aa7.57□□□□□ -1.2
CHD9-212ENST00000564641 NT5C1AQ9BXI3 368 aa7.57□□□□□ -1.2
CHD9-212ENST00000564641 CNNM2Q9H8M5 875 aa7.57□□□□□ -1.2
CHD9-212ENST00000564641 SHISA3A0PJX4 238 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 CRKP46108 304 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 TEKQ02763 1124 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 NBPF12Q5TAG4 269 aaPredicted RBP7.56□□□□□ -1.2
CHD9-212ENST00000564641 OVOS1Q6IE37 1185 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 NLRC3Q7RTR2 1065 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 HDAC8Q9BY41 377 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 RNF32Q9H0A6 362 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 SP110Q9HB58 689 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 ADAMTS1Q9UHI8 967 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 ZNF281Q9Y2X9 895 aa7.56□□□□□ -1.2
CHD9-212ENST00000564641 CLEC3AO75596 197 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 MED14OSP0DP75 135 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 GLDCP23378 1020 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 MCM4P33991 863 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 PCBP3P57721 371 aaKnown RBP7.55□□□□□ -1.2
CHD9-212ENST00000564641 NBPF9Q3BBW0 867 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 SEZ6Q53EL9 994 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 SLITRK4Q8IW52 837 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 LINC01599Q8WXQ3 324 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 ATG4CQ96DT6 458 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms