RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 COG2Q14746 738 aa16.73■□□□□ 0.27
KNOP1-202ENST00000564480 SLFNL1Q499Z3 407 aa16.73■□□□□ 0.27
KNOP1-202ENST00000564480 CERS3Q8IU89 383 aa16.73■□□□□ 0.27
KNOP1-202ENST00000564480 SDR42E1Q8WUS8 393 aa16.73■□□□□ 0.27
KNOP1-202ENST00000564480 IL1RAPL2Q9NP60 686 aa16.73■□□□□ 0.27
KNOP1-202ENST00000564480 TCRBV5S4A2TA0A5A2 114 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 MSCO60682 206 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 ERCC3P19447 782 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 FAM109BQ6ICB4 259 aaPredicted RBP16.72■□□□□ 0.27
KNOP1-202ENST00000564480 DPP9Q86TI2 863 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 DYNLL2Q96FJ2 89 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 LBHD1Q9BQE6 289 aaPredicted RBP16.72■□□□□ 0.27
KNOP1-202ENST00000564480 COL25A1Q9BXS0 654 aaPredicted RBP16.72■□□□□ 0.27
KNOP1-202ENST00000564480 SPATC1LQ9H0A9 340 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 MCM9Q9NXL9 1143 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 LAMA2P24043 3122 aaKnown RBP16.72■□□□□ 0.27
KNOP1-202ENST00000564480 RLFQ13129 1914 aa16.72■□□□□ 0.27
KNOP1-202ENST00000564480 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
KNOP1-202ENST00000564480 SHHQ15465 462 aa16.71■□□□□ 0.27
KNOP1-202ENST00000564480 C9orf50Q5SZB4 431 aa16.71■□□□□ 0.27
KNOP1-202ENST00000564480 OLFML2BQ68BL8 750 aa16.71■□□□□ 0.27
KNOP1-202ENST00000564480 SLC39A5Q6ZMH5 540 aa16.71■□□□□ 0.27
KNOP1-202ENST00000564480 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
KNOP1-202ENST00000564480 LCORLQ8N3X6 602 aa16.71■□□□□ 0.27
KNOP1-202ENST00000564480 DCP1AQ9NPI6 582 aaPredicted RBP16.71■□□□□ 0.27
KNOP1-202ENST00000564480 ATP11BQ9Y2G3 1177 aa16.71■□□□□ 0.27
KNOP1-202ENST00000564480 UNC80Q8N2C7 3258 aa16.71■□□□□ 0.26
KNOP1-202ENST00000564480 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 PRKAB2O43741 272 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 CHGBP05060 677 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 SH3RF1Q7Z6J0 888 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 SPICE1Q8N0Z3 855 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 ATG4CQ96DT6 458 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 TANGO6Q9C0B7 1094 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 HOXC10Q9NYD6 342 aa16.7■□□□□ 0.26
KNOP1-202ENST00000564480 LTBP2Q14767 1821 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 STRNO43815 780 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 AKR1B1P15121 316 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 DSG3P32926 999 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 TRIM60Q495X7 471 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 TMED8Q6PL24 325 aaPredicted RBP16.69■□□□□ 0.26
KNOP1-202ENST00000564480 ARRDC4Q8NCT1 418 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 SHCBP1Q8NEM2 672 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 FERMT2Q96AC1 680 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
KNOP1-202ENST00000564480 ARMT1Q9H993 441 aa16.69■□□□□ 0.26
KNOP1-202ENST00000564480 A0A0G2JMZ2 1700 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 CYP2D7A0A087X1C5 515 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 TRIM43BA6NCK2 446 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 GOLIM4O00461 696 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 SEPT4O43236 478 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
KNOP1-202ENST00000564480 ADCYAP1R1P41586 468 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 SNX17Q15036 470 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.68■□□□□ 0.26
KNOP1-202ENST00000564480 BADQ92934 168 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 TRIM43Q96BQ3 446 aaPredicted RBP16.68■□□□□ 0.26
KNOP1-202ENST00000564480 ZNF236Q9UL36 1845 aa16.68■□□□□ 0.26
KNOP1-202ENST00000564480 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 APBB1O00213 710 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 ITGB8P26012 769 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 PLS1Q14651 629 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 TMEM132BQ14DG7 1078 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 LRRC41Q15345 812 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 FAM47AQ5JRC9 791 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 NCAPG2Q86XI2 1143 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 ERC1Q8IUD2 1116 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 MAML3Q96JK9 1138 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
KNOP1-202ENST00000564480 PRDM5Q9NQX1 630 aaPredicted RBP16.67■□□□□ 0.26
KNOP1-202ENST00000564480 PDLIM7Q9NR12 457 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 TMX2Q9Y320 296 aa16.67■□□□□ 0.26
KNOP1-202ENST00000564480 FLOT1O75955 427 aa16.66■□□□□ 0.26
KNOP1-202ENST00000564480 TAL1P17542 331 aaPredicted RBP16.66■□□□□ 0.26
KNOP1-202ENST00000564480 TTF1Q15361 905 aaPredicted RBP16.66■□□□□ 0.26
KNOP1-202ENST00000564480 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
KNOP1-202ENST00000564480 SIRT2Q8IXJ6 389 aa16.66■□□□□ 0.26
KNOP1-202ENST00000564480 CDX2Q99626 313 aaPredicted RBP16.66■□□□□ 0.26
KNOP1-202ENST00000564480 MROH8Q9H579 483 aa16.66■□□□□ 0.26
KNOP1-202ENST00000564480 VCPKMTQ9H867 229 aa16.66■□□□□ 0.26
KNOP1-202ENST00000564480 FBXO28Q9NVF7 368 aa16.66■□□□□ 0.26
KNOP1-202ENST00000564480 PRKAG2Q9UGJ0 569 aa16.66■□□□□ 0.26
KNOP1-202ENST00000564480 KBTBD13C9JR72 458 aa16.65■□□□□ 0.26
KNOP1-202ENST00000564480 PGK2P07205 417 aa16.65■□□□□ 0.26
KNOP1-202ENST00000564480 EPHB4P54760 987 aa16.65■□□□□ 0.26
KNOP1-202ENST00000564480 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
KNOP1-202ENST00000564480 MB21D1Q8N884 522 aa16.65■□□□□ 0.26
KNOP1-202ENST00000564480 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
KNOP1-202ENST00000564480 TTYH1Q9H313 450 aaPredicted RBP16.65■□□□□ 0.26
KNOP1-202ENST00000564480 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
KNOP1-202ENST00000564480 ADAMTS5Q9UNA0 930 aa16.65■□□□□ 0.26
KNOP1-202ENST00000564480 MBD4O95243 580 aa16.64■□□□□ 0.25
KNOP1-202ENST00000564480 CDK8P49336 464 aa16.64■□□□□ 0.25
KNOP1-202ENST00000564480 TLE2Q04725 743 aa16.64■□□□□ 0.25
KNOP1-202ENST00000564480 ICA1Q05084 483 aa16.64■□□□□ 0.25
KNOP1-202ENST00000564480 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms