RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 RTKN2Q8IZC4 609 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 CCDC155Q8N6L0 562 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 ZDHHC1Q8WTX9 485 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 SCG3Q8WXD2 468 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 EAF2Q96CJ1 260 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 CCDC136Q96JN2 1154 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 PSMD1Q99460 953 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 LRRCC1Q9C099 1032 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 TIMMDC1Q9NPL8 285 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 NSFL1CQ9UNZ2 370 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 LEMD3Q9Y2U8 911 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 FPGT-TNNI3KV9GXZ4 949 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 ZNF804BA4D1E1 1349 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 SALL3Q9BXA9 1300 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 LTBP3Q9NS15 1303 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 COL4A5P29400 1685 aa6.38□□□□□ -1.39
HERPUD1-207ENST00000563781 A0A1B0GUL6 1792 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 MED23Q9ULK4 1368 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 IGFBP4P22692 258 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 NOS2P35228 1153 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 PSMA6P60900 246 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 TIMM10P62072 90 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 NUCB1Q02818 461 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 ANKRD45Q5TZF3 282 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 CENPQQ7L2Z9 268 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 NPAS4Q8IUM7 802 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 C16orf71Q8IYS4 520 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 OTUD7AQ8TE49 926 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 LPIN2Q92539 896 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 CLP1Q92989 425 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 DBNDD2Q9BQY9 259 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 CCDC8Q9H0W5 538 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 ZNF277Q9NRM2 450 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 ANKIB1Q9P2G1 1089 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 NXF1Q9UBU9 619 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 DBNLQ9UJU6 430 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 DYRK1BQ9Y463 629 aa6.37□□□□□ -1.39
HERPUD1-207ENST00000563781 SPEF2Q9C093 1822 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 PPFIA3O75145 1194 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 SLC5A1P13866 664 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 PHKA1P46020 1223 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 GYG1P46976 350 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 PLA2G4AP47712 749 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 KCNJ4P48050 445 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 KIAA2012Q0VF49 1180 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 GPR162Q16538 588 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 OCLNQ16625 522 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 AOC3Q16853 763 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 ARHGAP27Q6ZUM4 889 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 FBXO33Q7Z6M2 555 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 AACSQ86V21 672 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 CHD1LQ86WJ1 897 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 SKAP1Q86WV1 359 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 CLASRPQ8N2M8 674 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 STAG2Q8N3U4 1231 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 SUPT20HQ8NEM7 779 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 FAM84BQ96KN1 310 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 PRIMPOLQ96LW4 560 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 LNPKQ9C0E8 428 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 TAOK3Q9H2K8 898 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 AKAP2Q9Y2D5 859 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 ARFGEF1Q9Y6D6 1849 aa6.36□□□□□ -1.39
HERPUD1-207ENST00000563781 COL1A1P02452 1464 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 CACNA1SQ13698 1873 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 A0A1B0GTH6 734 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 SERTM1A2A2V5 107 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 EML1O00423 815 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 PPIP5K2O43314 1243 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 PPP1R12BO60237 982 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 F11P03951 625 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 IFIT1P09914 478 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 MSX1P28360 303 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 IARSP41252 1262 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 MARSP56192 900 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 SH3PXD2AQ5TCZ1 1133 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 C1orf216Q8TAB5 229 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 NEUROD6Q96NK8 337 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 EYA3Q99504 573 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 C2orf49Q9BVC5 232 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 ZC3H12CQ9C0D7 883 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 TMX4Q9H1E5 349 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 VPS33BQ9H267 617 aa6.35□□□□□ -1.39
HERPUD1-207ENST00000563781 FER1L6Q2WGJ9 1857 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 ARAP2Q8WZ64 1704 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 YDJCA8MPS7 323 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 TERTO14746 1132 aaKnown RBP6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 ECE2O60344 883 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 GRIN3BO60391 1043 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 PRMT3O60678 531 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 IL1R1P14778 569 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 LMNB1P20700 586 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 HIBADHP31937 336 aaKnown RBP6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 TXLNAP40222 546 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 HIRAP54198 1017 aaPredicted RBP6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 TSHZ3Q63HK5 1081 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 ZNF804AQ7Z570 1209 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 NPAS3Q8IXF0 933 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 TDRD7Q8NHU6 1098 aaKnown RBP6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 GIPC2Q8TF65 315 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 AIDAQ96BJ3 306 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms