RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 GPIHBP1Q8IV16 184 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 DRC1Q96MC2 740 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 CSRNP2Q9H175 543 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 MKRN1Q9UHC7 482 aaKnown RBP11.76□□□□□ -0.53
RNF40-204ENST00000563683 KIF28PB7ZC32 967 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 TRIM66O15016 1216 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 IFNAR1P17181 557 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 CDC25AP30304 524 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 MATR3P43243 847 aaKnown RBP eCLIP11.76□□□□□ -0.53
RNF40-204ENST00000563683 NOP2P46087 812 aaKnown RBP11.76□□□□□ -0.53
RNF40-204ENST00000563683 TNNI2P48788 182 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 TRIM28Q13263 835 aaKnown RBP11.76□□□□□ -0.53
RNF40-204ENST00000563683 TRAPPC3LQ5T215 181 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 ICE2Q659A1 982 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 SMYD4Q8IYR2 804 aaPredicted RBP11.76□□□□□ -0.53
RNF40-204ENST00000563683 JADE2Q9NQC1 790 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 SYNRGQ9UMZ2 1314 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 ERVV-1B6SEH8 477 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 PTGDRQ13258 359 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 TTC31Q49AM3 519 aaPredicted RBP11.76□□□□□ -0.53
RNF40-204ENST00000563683 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 CNBD1Q8NA66 436 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 GPKOWQ92917 476 aaPredicted RBP eCLIP11.76□□□□□ -0.535e-7■■■■■ 43.5
RNF40-204ENST00000563683 GBP3Q9H0R5 595 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 STX10O60499 249 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 UFL1O94874 794 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 TUBB2AQ13885 445 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 NALCNQ8IZF0 1738 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 CEP112Q8N8E3 955 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 HNRNPLLQ8WVV9 542 aaKnown RBP11.76□□□□□ -0.53
RNF40-204ENST00000563683 TUBB2BQ9BVA1 445 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 C6orf50Q9HD87 102 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 TAB2Q9NYJ8 693 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 VPS18Q9P253 973 aa11.76□□□□□ -0.53
RNF40-204ENST00000563683 RIMS1Q86UR5 1692 aaKnown RBP11.75□□□□□ -0.53
RNF40-204ENST00000563683 AKR1B10O60218 316 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 PPP6R2O75170 966 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
RNF40-204ENST00000563683 GOLGA8HP0CJ92 632 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
RNF40-204ENST00000563683 MAGEA9P43362 315 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 CCDC40Q4G0X9 1142 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
RNF40-204ENST00000563683 ZNF622Q969S3 477 aaKnown RBP eCLIP11.75□□□□□ -0.537e-8■■□□□ 13.5
RNF40-204ENST00000563683 MMRN2Q9H8L6 949 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 LIFRP42702 1097 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 PPP2R5BQ15173 497 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 ZC3H12CQ9C0D7 883 aaKnown RBP11.75□□□□□ -0.53
RNF40-204ENST00000563683 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.75□□□□□ -0.53
RNF40-204ENST00000563683 PALLDQ8WX93 1383 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 MMP1P03956 469 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 TUBBP07437 444 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 WWC2Q6AWC2 1192 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 RRP36Q96EU6 259 aaKnown RBP11.75□□□□□ -0.53
RNF40-204ENST00000563683 TSG101Q99816 390 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 SENP2Q9HC62 589 aa11.75□□□□□ -0.53
RNF40-204ENST00000563683 LUC7LQ9NQ29 371 aaKnown RBP11.75□□□□□ -0.53
RNF40-204ENST00000563683 MEGF6O75095 1541 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 MAP2K7O14733 419 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 RHOXF2BP0C7M4 288 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 RHOXF2Q9BQY4 288 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 EPC1Q9H2F5 836 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 GEMIN8Q9NWZ8 242 aaKnown RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 LCMT1Q9UIC8 334 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 LUC7L2Q9Y383 392 aaKnown RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 ARID4AP29374 1257 aaPredicted RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 CHMP4BP1P59074 171 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 UBE4AQ14139 1066 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 TCERG1LQ5VWI1 586 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 RASGRP4Q8TDF6 673 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 FERMT2Q96AC1 680 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
RNF40-204ENST00000563683 GPCPD1Q9NPB8 672 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 CTAGE9A4FU28 777 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 CCNT1O60563 726 aaKnown RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 RPS6KA5O75582 802 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 WDHD1O75717 1129 aaPredicted RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 PARP1P09874 1014 aaKnown RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 KRT9P35527 623 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 TXKP42681 527 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 CNGA4Q8IV77 575 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 PNMA1Q8ND90 353 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 PPM1EQ8WY54 764 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 EPSTI1Q96J88 318 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 SEPT11Q9NVA2 429 aaKnown RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 SOS2Q07890 1332 aaPredicted RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 PLEKHG2Q9H7P9 1386 aa11.74□□□□□ -0.53
RNF40-204ENST00000563683 KDM6AO15550 1401 aaPredicted RBP11.74□□□□□ -0.53
RNF40-204ENST00000563683 USO1O60763 962 aaKnown RBP11.73□□□□□ -0.53
RNF40-204ENST00000563683 GNA11P29992 359 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 ANTXR2P58335 489 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 FMN2Q9NZ56 1722 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 CASP1P29466 404 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 SRGAP1Q7Z6B7 1085 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 WDR66Q8TBY9 1149 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 CAPZA3Q96KX2 299 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 WDR24Q96S15 920 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 CRACR2AQ9BSW2 395 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms