RNA–Protein interactions for RNA: ENST00000563600.5

BBS4-206, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-206ENST00000563600 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
BBS4-206ENST00000563600 RANBP6O60518 1105 aaKnown RBP17.56■□□□□ 0.4
BBS4-206ENST00000563600 GCLCP48506 637 aaPredicted RBP17.56■□□□□ 0.4
BBS4-206ENST00000563600 FCGRTP55899 365 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 ARHGEF6Q15052 776 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 POTEEQ6S8J3 1075 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 CATSPERGQ6ZRH7 1159 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 TBC1D10CQ8IV04 446 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
BBS4-206ENST00000563600 NBPF3Q9H094 633 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 SH2D4AQ9H788 454 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 VCPKMTQ9H867 229 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 ANAPC4Q9UJX5 808 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 PTCH2Q9Y6C5 1203 aa17.56■□□□□ 0.4
BBS4-206ENST00000563600 GREB1LQ9C091 1923 aaPredicted RBP17.55■□□□□ 0.4
BBS4-206ENST00000563600 IGKV6D-41A0A0C4DH26 115 aa17.55■□□□□ 0.4
BBS4-206ENST00000563600 TSPY2A6NKD2 308 aa17.55■□□□□ 0.4
BBS4-206ENST00000563600 NMT2O60551 498 aa17.55■□□□□ 0.4
BBS4-206ENST00000563600 FAM110CQ1W6H9 321 aa17.55■□□□□ 0.4
BBS4-206ENST00000563600 CHMP4CQ96CF2 233 aa17.55■□□□□ 0.4
BBS4-206ENST00000563600 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
BBS4-206ENST00000563600 TNPO2O14787 897 aaKnown RBP17.54■□□□□ 0.4
BBS4-206ENST00000563600 NEDD1Q8NHV4 660 aa17.54■□□□□ 0.4
BBS4-206ENST00000563600 RUFY2Q8WXA3 655 aa17.54■□□□□ 0.4
BBS4-206ENST00000563600 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
BBS4-206ENST00000563600 GOPCQ9HD26 462 aa17.54■□□□□ 0.4
BBS4-206ENST00000563600 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
BBS4-206ENST00000563600 RBPJLQ9UBG7 517 aa17.54■□□□□ 0.4
BBS4-206ENST00000563600 MYPNQ86TC9 1320 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 ZNF213O14771 459 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 PRKCZQ05513 592 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 FAM83BQ5T0W9 1011 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 LPAR1Q92633 364 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 DSCC1Q9BVC3 393 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 NYAP2Q9P242 653 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 GABRQQ9UN88 632 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
BBS4-206ENST00000563600 HTTP42858 3142 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 NEDD4P46934 1319 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 RAD50Q92878 1312 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 SPDYE16A6NNV3 312 aaPredicted RBP17.52■□□□□ 0.4
BBS4-206ENST00000563600 WDR46O15213 610 aaKnown RBP17.52■□□□□ 0.4
BBS4-206ENST00000563600 ORC4O43929 436 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 FLOT1O75955 427 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 TTLL1O95922 423 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 MYCP01106 439 aaPredicted RBP17.52■□□□□ 0.4
BBS4-206ENST00000563600 ERVK-9P63128 1117 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 ERVK-24P63145 666 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 PTH1RQ03431 593 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 Q3C1V9 767 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 GPRC5AQ8NFJ5 357 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 IL17RBQ9NRM6 502 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 FBXO28Q9NVF7 368 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 MORF4L1Q9UBU8 362 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 SRRDQ9UH36 339 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 STX8Q9UNK0 236 aa17.52■□□□□ 0.4
BBS4-206ENST00000563600 F5H6K3 240 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 SGSM2O43147 1006 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 CNMDO75829 334 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 NDUFB10O96000 172 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 FGRP09769 529 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 HOXD10P28358 340 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 SOX10P56693 466 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 KLRC3Q07444 240 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 SH3TC2Q8TF17 1288 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 STAG1Q8WVM7 1258 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 PORCNQ9H237 461 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 BTBD7Q9P203 1132 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 ISY1Q9ULR0 285 aaKnown RBP17.51■□□□□ 0.39
BBS4-206ENST00000563600 MTMR7Q9Y216 660 aa17.51■□□□□ 0.39
BBS4-206ENST00000563600 MGAMO43451 1857 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 GNRH1P01148 92 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 FLT3LGP49771 235 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 COG2Q14746 738 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 IMMTQ16891 758 aaKnown RBP17.5■□□□□ 0.39
BBS4-206ENST00000563600 SLC9C1Q4G0N8 1177 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 RASGRP2Q7LDG7 609 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 CCAR1Q8IX12 1150 aaKnown RBP17.5■□□□□ 0.39
BBS4-206ENST00000563600 RAET1EQ8TD07 263 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 ATG4CQ96DT6 458 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 PPP4R2Q9NY27 417 aa17.5■□□□□ 0.39
BBS4-206ENST00000563600 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
BBS4-206ENST00000563600 WDR78Q5VTH9 848 aa17.49■□□□□ 0.39
BBS4-206ENST00000563600 GTF3C2Q8WUA4 911 aaPredicted RBP17.49■□□□□ 0.39
BBS4-206ENST00000563600 COA7Q96BR5 231 aa17.49■□□□□ 0.39
BBS4-206ENST00000563600 ZKSCAN3Q9BRR0 538 aa17.49■□□□□ 0.39
BBS4-206ENST00000563600 RNF41Q9H4P4 317 aaPredicted RBP17.49■□□□□ 0.39
BBS4-206ENST00000563600 CWC22Q9HCG8 908 aaKnown RBP17.49■□□□□ 0.39
BBS4-206ENST00000563600 HOXC10Q9NYD6 342 aa17.49■□□□□ 0.39
BBS4-206ENST00000563600 CTNNA3Q9UI47 895 aa17.49■□□□□ 0.39
BBS4-206ENST00000563600 RABGAP1Q9Y3P9 1069 aa17.49■□□□□ 0.39
BBS4-206ENST00000563600 LAMA4Q16363 1823 aa17.49■□□□□ 0.39
BBS4-206ENST00000563600 B4E1Z4 1266 aa17.48■□□□□ 0.39
BBS4-206ENST00000563600 DSG3P32926 999 aa17.48■□□□□ 0.39
BBS4-206ENST00000563600 PLS1Q14651 629 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms