RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 RHPN1Q8TCX5 695 aa22.62■■□□□ 1.21
NME3-204ENST00000563498 LBHD1Q9BQE6 289 aaPredicted RBP22.62■■□□□ 1.21
NME3-204ENST00000563498 SPATC1LQ9H0A9 340 aa22.62■■□□□ 1.21
NME3-204ENST00000563498 DCP1AQ9NPI6 582 aaPredicted RBP22.62■■□□□ 1.21
NME3-204ENST00000563498 MPHOSPH10O00566 681 aaKnown RBP22.61■■□□□ 1.21
NME3-204ENST00000563498 ADORA2AP29274 412 aa22.61■■□□□ 1.21
NME3-204ENST00000563498 FAM109BQ6ICB4 259 aaPredicted RBP22.61■■□□□ 1.21
NME3-204ENST00000563498 TMEM179Q6ZVK1 233 aa22.61■■□□□ 1.21
NME3-204ENST00000563498 TANGO6Q9C0B7 1094 aa22.61■■□□□ 1.21
NME3-204ENST00000563498 IL1RAPL2Q9NP60 686 aa22.61■■□□□ 1.21
NME3-204ENST00000563498 SWAP70Q9UH65 585 aa22.61■■□□□ 1.21
NME3-204ENST00000563498 ZNF532Q9HCE3 1301 aa22.6■■□□□ 1.21
NME3-204ENST00000563498 TCRBV5S4A2TA0A5A2 114 aa22.6■■□□□ 1.21
NME3-204ENST00000563498 CLASRPQ8N2M8 674 aaKnown RBP22.6■■□□□ 1.21
NME3-204ENST00000563498 ARRDC4Q8NCT1 418 aa22.6■■□□□ 1.21
NME3-204ENST00000563498 RLFQ13129 1914 aa22.6■■□□□ 1.21
NME3-204ENST00000563498 ERCC3P19447 782 aa22.59■■□□□ 1.21
NME3-204ENST00000563498 ATN1P54259 1190 aaPredicted RBP22.59■■□□□ 1.21
NME3-204ENST00000563498 EVX2Q03828 476 aa22.59■■□□□ 1.21
NME3-204ENST00000563498 ABRAQ8N0Z2 381 aa22.59■■□□□ 1.21
NME3-204ENST00000563498 SDR42E1Q8WUS8 393 aa22.59■■□□□ 1.21
NME3-204ENST00000563498 MROH8Q9H579 483 aa22.59■■□□□ 1.21
NME3-204ENST00000563498 SLC5A4Q9NY91 659 aa22.59■■□□□ 1.21
NME3-204ENST00000563498 PRKAG2Q9UGJ0 569 aa22.59■■□□□ 1.21
NME3-204ENST00000563498 A0A0C4DFX4 3053 aa22.59■■□□□ 1.21
NME3-204ENST00000563498 DNAH12Q6ZR08 3092 aa22.58■■□□□ 1.21
NME3-204ENST00000563498 POTEB2H3BUK9 544 aa22.58■■□□□ 1.21
NME3-204ENST00000563498 GOLIM4O00461 696 aa22.58■■□□□ 1.21
NME3-204ENST00000563498 SEPT4O43236 478 aa22.58■■□□□ 1.21
NME3-204ENST00000563498 RTP1P59025 263 aa22.58■■□□□ 1.21
NME3-204ENST00000563498 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
NME3-204ENST00000563498 LCORLQ8N3X6 602 aa22.58■■□□□ 1.21
NME3-204ENST00000563498 KIF1BPQ96EK5 621 aa22.58■■□□□ 1.21
NME3-204ENST00000563498 SH2D4AQ9H788 454 aa22.58■■□□□ 1.21
NME3-204ENST00000563498 COBLO75128 1261 aa22.57■■□□□ 1.2
NME3-204ENST00000563498 DSG3P32926 999 aa22.57■■□□□ 1.2
NME3-204ENST00000563498 DNAJC2Q99543 621 aaKnown RBP22.57■■□□□ 1.2
NME3-204ENST00000563498 ARHGEF10LQ9HCE6 1279 aa22.57■■□□□ 1.2
NME3-204ENST00000563498 TMX2Q9Y320 296 aa22.57■■□□□ 1.2
NME3-204ENST00000563498 IFIT2P09913 472 aaKnown RBP22.56■■□□□ 1.2
NME3-204ENST00000563498 KIAA1755Q5JYT7 1200 aa22.56■■□□□ 1.2
NME3-204ENST00000563498 GJC2Q5T442 439 aaPredicted RBP22.56■■□□□ 1.2
NME3-204ENST00000563498 SIAH1Q8IUQ4 282 aa22.56■■□□□ 1.2
NME3-204ENST00000563498 RPAP2Q8IXW5 612 aaPredicted RBP22.56■■□□□ 1.2
NME3-204ENST00000563498 SLC44A5Q8NCS7 719 aa22.56■■□□□ 1.2
NME3-204ENST00000563498 PANK1Q8TE04 598 aa22.56■■□□□ 1.2
NME3-204ENST00000563498 LTBP2Q14767 1821 aa22.56■■□□□ 1.2
NME3-204ENST00000563498 KBTBD13C9JR72 458 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 FLOT1O75955 427 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 CYP2D6P10635 497 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 ICA1Q05084 483 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 SNX17Q15036 470 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 SLC39A5Q6ZMH5 540 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 CCDC17Q96LX7 622 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 VCPKMTQ9H867 229 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 ATP8A2Q9NTI2 1148 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 CUL9Q8IWT3 2517 aa22.55■■□□□ 1.2
NME3-204ENST00000563498 WDR46O15213 610 aaKnown RBP22.54■■□□□ 1.2
NME3-204ENST00000563498 MS4A1P11836 297 aa22.54■■□□□ 1.2
NME3-204ENST00000563498 NCAPG2Q86XI2 1143 aa22.54■■□□□ 1.2
NME3-204ENST00000563498 DYNLL2Q96FJ2 89 aa22.54■■□□□ 1.2
NME3-204ENST00000563498 ARMT1Q9H993 441 aa22.54■■□□□ 1.2
NME3-204ENST00000563498 ATP11BQ9Y2G3 1177 aa22.54■■□□□ 1.2
NME3-204ENST00000563498 MYH8P13535 1937 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 HMMRO75330 724 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 SLC25A27O95847 323 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 AKR1B1P15121 316 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 ADD2P35612 726 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 PLS1Q14651 629 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 C1orf53Q5VUE5 145 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 ATG4CQ96DT6 458 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 MAML3Q96JK9 1138 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 PAG1Q9NWQ8 432 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 NRBP1Q9UHY1 535 aa22.53■■□□□ 1.2
NME3-204ENST00000563498 RAB11FIP3O75154 756 aa22.52■■□□□ 1.2
NME3-204ENST00000563498 MBD4O95243 580 aa22.52■■□□□ 1.2
NME3-204ENST00000563498 FCER1AP12319 257 aa22.52■■□□□ 1.2
NME3-204ENST00000563498 C12orf60Q5U649 245 aa22.52■■□□□ 1.2
NME3-204ENST00000563498 SPICE1Q8N0Z3 855 aa22.52■■□□□ 1.2
NME3-204ENST00000563498 GUCD1Q96NT3 240 aa22.52■■□□□ 1.2
NME3-204ENST00000563498 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.52■■□□□ 1.25e-32■■■■□ 24.1
NME3-204ENST00000563498 ADAMTS5Q9UNA0 930 aa22.52■■□□□ 1.2
NME3-204ENST00000563498 PARP14Q460N5 1801 aa22.52■■□□□ 1.2
NME3-204ENST00000563498 APBB1O00213 710 aa22.51■■□□□ 1.19
NME3-204ENST00000563498 PRKAB2O43741 272 aa22.51■■□□□ 1.19
NME3-204ENST00000563498 TMEM132BQ14DG7 1078 aa22.51■■□□□ 1.19
NME3-204ENST00000563498 ANO1Q5XXA6 986 aa22.51■■□□□ 1.19
NME3-204ENST00000563498 CLEC10AQ8IUN9 316 aa22.51■■□□□ 1.19
NME3-204ENST00000563498 AMOTL1Q8IY63 956 aa22.51■■□□□ 1.19
NME3-204ENST00000563498 ATP5JP18859 108 aa22.5■■□□□ 1.19
NME3-204ENST00000563498 CDK8P49336 464 aa22.5■■□□□ 1.19
NME3-204ENST00000563498 LRRC41Q15345 812 aa22.5■■□□□ 1.19
NME3-204ENST00000563498 C16orf86Q6ZW13 317 aa22.5■■□□□ 1.19
NME3-204ENST00000563498 UBE3CQ15386 1083 aa22.49■■□□□ 1.19
NME3-204ENST00000563498 TRIM60Q495X7 471 aa22.49■■□□□ 1.19
NME3-204ENST00000563498 PRAMEF19Q5SWL8 479 aa22.49■■□□□ 1.19
NME3-204ENST00000563498 ZNF697Q5TEC3 545 aa22.49■■□□□ 1.19
NME3-204ENST00000563498 SIRT2Q8IXJ6 389 aa22.49■■□□□ 1.19
NME3-204ENST00000563498 DDRGK1Q96HY6 314 aa22.49■■□□□ 1.19
NME3-204ENST00000563498 KANSL2Q9H9L4 492 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms