RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZBTB7CA1YPR0 619 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 BTBD11A6QL63 1104 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 UBOX5O94941 541 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 ATE1O95260 518 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 GBP1P32455 592 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 HK2P52789 917 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 EGR3Q06889 387 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 MESP2Q0VG99 397 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 MLECQ14165 292 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 SEZ6Q53EL9 994 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 TMEM67Q5HYA8 995 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 OVOS1Q6IE37 1185 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 TMEM87AQ8NBN3 555 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 VWCEQ96DN2 955 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 BCL11AQ9H165 835 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 GMIPQ9P107 970 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 PCDHA11Q9Y5I1 949 aa5.9□□□□□ -1.46
HMGB1P33-201ENST00000563485 RGS13O14921 159 aa5.89□□□□□ -1.47
HMGB1P33-201ENST00000563485 RAG1P15918 1043 aa5.89□□□□□ -1.47
HMGB1P33-201ENST00000563485 LTKP29376 864 aa5.89□□□□□ -1.47
HMGB1P33-201ENST00000563485 POLR2BP30876 1174 aaKnown RBP5.89□□□□□ -1.47
HMGB1P33-201ENST00000563485 JAG1P78504 1218 aa5.89□□□□□ -1.47
HMGB1P33-201ENST00000563485 MPZL3Q6UWV2 235 aa5.89□□□□□ -1.47
HMGB1P33-201ENST00000563485 FAM53CQ9NYF3 392 aa5.89□□□□□ -1.47
HMGB1P33-201ENST00000563485 RBM47A0AV96 593 aaKnown RBP5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 RAC2P15153 192 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 CHMP4BP1P59074 171 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 CLCQ05315 142 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 APOBRQ0VD83 1088 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 PRR23BQ6ZRT6 265 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 GK5Q6ZS86 529 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 KSR1Q8IVT5 923 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 ABHD4Q8TB40 342 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 EHMT1Q9H9B1 1298 aa5.88□□□□□ -1.47
HMGB1P33-201ENST00000563485 HPXP02790 462 aa5.87□□□□□ -1.47
HMGB1P33-201ENST00000563485 MCM4P33991 863 aa5.87□□□□□ -1.47
HMGB1P33-201ENST00000563485 TRHRP34981 398 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P33-201ENST00000563485 MFAP1P55081 439 aaKnown RBP5.87□□□□□ -1.47
HMGB1P33-201ENST00000563485 FZD5Q13467 585 aa5.87□□□□□ -1.47
HMGB1P33-201ENST00000563485 FAM84AQ96KN4 292 aa5.87□□□□□ -1.47
HMGB1P33-201ENST00000563485 ZGLP1P0C6A0 271 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 ZNF76P36508 570 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 CLEC16AQ2KHT3 1053 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 CDCP2Q5VXM1 449 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 KIAA0825Q8IV33 1275 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 REXO1Q8N1G1 1221 aaKnown RBP5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 MYLIPQ8WY64 445 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 NKD1Q969G9 470 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 ATG4CQ96DT6 458 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 EAF1Q96JC9 268 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 DIRC2Q96SL1 478 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 SLC38A3Q99624 504 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 SPON2Q9BUD6 331 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 NT5C1AQ9BXI3 368 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 BACH2Q9BYV9 841 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 ANTXR1Q9H6X2 564 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 CNNM2Q9H8M5 875 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 SP110Q9HB58 689 aa5.86□□□□□ -1.47
HMGB1P33-201ENST00000563485 ZNF165P49910 485 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 RNF4P78317 190 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 FANCCQ00597 558 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 TEKQ02763 1124 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 NMIQ13287 307 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 PKN1Q16512 942 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 NBPF12Q5TAG4 269 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 NLRC3Q7RTR2 1065 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 TMC3Q7Z5M5 1100 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 SLITRK4Q8IW52 837 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 ZNF512BQ96KM6 892 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 HDAC8Q9BY41 377 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 ASCC2Q9H1I8 757 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 NSUN3Q9H649 340 aaKnown RBP5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 C19orf44Q9H6X5 657 aa5.85□□□□□ -1.47
HMGB1P33-201ENST00000563485 SNW1Q13573 536 aaKnown RBP5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 NBPF9Q3BBW0 867 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 TIGD5Q53EQ6 642 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 ZNF394Q53GI3 561 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 USP48Q86UV5 1035 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 PDZD8Q8NEN9 1154 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 RNF32Q9H0A6 362 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 KCNK12Q9HB15 430 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 EBF1Q9UH73 591 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 PCDHGB7Q9Y5F8 929 aa5.84□□□□□ -1.47
HMGB1P33-201ENST00000563485 MEIS3P2A8K0S8 358 aa5.83□□□□□ -1.48
HMGB1P33-201ENST00000563485 CLEC3AO75596 197 aa5.83□□□□□ -1.48
HMGB1P33-201ENST00000563485 NME1P15531 152 aaKnown RBP5.83□□□□□ -1.48
HMGB1P33-201ENST00000563485 SYDE1Q6ZW31 735 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P33-201ENST00000563485 ENOX1Q8TC92 643 aaKnown RBP5.83□□□□□ -1.48
HMGB1P33-201ENST00000563485 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P33-201ENST00000563485 DHX38Q92620 1227 aaKnown RBP5.83□□□□□ -1.48
HMGB1P33-201ENST00000563485 ARID1BQ8NFD5 2236 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 DBX1A6NMT0 343 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 TNFRSF10CO14798 259 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 RECKO95980 971 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 TMEM192Q8IY95 271 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 OXR1Q8N573 874 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 USHBP1Q8N6Y0 703 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 SYTL4Q96C24 671 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 TCTN2Q96GX1 697 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms