RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 CWC27Q6UX04 472 aaKnown RBP33.68■■■□□ 2.98
NME3-203ENST00000563367 SPICE1Q8N0Z3 855 aa33.68■■■□□ 2.98
NME3-203ENST00000563367 SH2D4AQ9H788 454 aa33.68■■■□□ 2.98
NME3-203ENST00000563367 VCPKMTQ9H867 229 aa33.68■■■□□ 2.98
NME3-203ENST00000563367 INCENPQ9NQS7 918 aa33.68■■■□□ 2.98
NME3-203ENST00000563367 TACC3Q9Y6A5 838 aa33.68■■■□□ 2.98
NME3-203ENST00000563367 IGKV6D-41A0A0C4DH26 115 aa33.67■■■□□ 2.98
NME3-203ENST00000563367 SLC3A2P08195 630 aaKnown RBP33.67■■■□□ 2.98
NME3-203ENST00000563367 PDE4BQ07343 736 aa33.67■■■□□ 2.98
NME3-203ENST00000563367 Q3C1V9 767 aa33.67■■■□□ 2.98
NME3-203ENST00000563367 GPRC5AQ8NFJ5 357 aa33.67■■■□□ 2.98
NME3-203ENST00000563367 DIAPH3Q9NSV4 1193 aa33.67■■■□□ 2.98
NME3-203ENST00000563367 PLXNB2O15031 1838 aa33.67■■■□□ 2.98
NME3-203ENST00000563367 SH3TC2Q8TF17 1288 aa33.66■■■□□ 2.98
NME3-203ENST00000563367 GTF3C2Q8WUA4 911 aaPredicted RBP33.66■■■□□ 2.98
NME3-203ENST00000563367 LPAR1Q92633 364 aa33.66■■■□□ 2.98
NME3-203ENST00000563367 PAGR1Q9BTK6 254 aa33.66■■■□□ 2.98
NME3-203ENST00000563367 ANAPC4Q9UJX5 808 aa33.66■■■□□ 2.98
NME3-203ENST00000563367 RGS19P49795 217 aa33.65■■■□□ 2.98
NME3-203ENST00000563367 RAET1EQ8TD07 263 aa33.65■■■□□ 2.98
NME3-203ENST00000563367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.65■■■□□ 2.98
NME3-203ENST00000563367 KIAA0100Q14667 2235 aaKnown RBP33.64■■■□□ 2.98
NME3-203ENST00000563367 HIP1O00291 1037 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 CNMDO75829 334 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 FLT3LGP49771 235 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 ERVK-9P63128 1117 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 ERVK-24P63145 666 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 FAM47AQ5JRC9 791 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 ZNF333Q96JL9 665 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 TANGO6Q9C0B7 1094 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 NYAP2Q9P242 653 aa33.64■■■□□ 2.98
NME3-203ENST00000563367 SPDYE16A6NNV3 312 aaPredicted RBP33.63■■■□□ 2.97
NME3-203ENST00000563367 LBX2Q6XYB7 198 aa33.63■■■□□ 2.97
NME3-203ENST00000563367 NEDD1Q8NHV4 660 aa33.63■■■□□ 2.97
NME3-203ENST00000563367 COA7Q96BR5 231 aa33.63■■■□□ 2.97
NME3-203ENST00000563367 MFAP1P55081 439 aaKnown RBP33.62■■■□□ 2.97
NME3-203ENST00000563367 TFAP4Q01664 338 aa33.62■■■□□ 2.97
NME3-203ENST00000563367 COG2Q14746 738 aa33.62■■■□□ 2.97
NME3-203ENST00000563367 NBPF11Q86T75 865 aa33.62■■■□□ 2.97
NME3-203ENST00000563367 CEP95Q96GE4 821 aa33.62■■■□□ 2.97
NME3-203ENST00000563367 RABGAP1Q9Y3P9 1069 aa33.62■■■□□ 2.97
NME3-203ENST00000563367 RBBP6Q7Z6E9 1792 aaKnown RBP33.62■■■□□ 2.97
NME3-203ENST00000563367 PLIN4Q96Q06 1357 aa33.61■■■□□ 2.97
NME3-203ENST00000563367 ZMYM6O95789 1325 aa33.61■■■□□ 2.97
NME3-203ENST00000563367 GOPCQ9HD26 462 aa33.61■■■□□ 2.97
NME3-203ENST00000563367 MTMR4Q9NYA4 1195 aa33.61■■■□□ 2.97
NME3-203ENST00000563367 BTBD7Q9P203 1132 aa33.61■■■□□ 2.97
NME3-203ENST00000563367 CLIP2Q9UDT6 1046 aa33.61■■■□□ 2.97
NME3-203ENST00000563367 A0A0G2JMZ2 1700 aa33.61■■■□□ 2.97
NME3-203ENST00000563367 COL11A1P12107 1806 aaPredicted RBP33.6■■■□□ 2.97
NME3-203ENST00000563367 WDR46O15213 610 aaKnown RBP33.6■■■□□ 2.97
NME3-203ENST00000563367 TSPY3P0CV98 308 aa33.6■■■□□ 2.97
NME3-203ENST00000563367 TSPY8P0CW00 308 aa33.6■■■□□ 2.97
NME3-203ENST00000563367 PORCNQ9H237 461 aa33.6■■■□□ 2.97
NME3-203ENST00000563367 IL25Q9H293 177 aa33.6■■■□□ 2.97
NME3-203ENST00000563367 LAMA4Q16363 1823 aa33.59■■■□□ 2.97
NME3-203ENST00000563367 GRK4P32298 578 aa33.59■■■□□ 2.97
NME3-203ENST00000563367 HOXC10Q9NYD6 342 aa33.59■■■□□ 2.97
NME3-203ENST00000563367 GJD2Q9UKL4 321 aa33.59■■■□□ 2.97
NME3-203ENST00000563367 RAD21O60216 631 aa33.58■■■□□ 2.97
NME3-203ENST00000563367 FGRP09769 529 aa33.58■■■□□ 2.97
NME3-203ENST00000563367 HAND2P61296 217 aa33.58■■■□□ 2.97
NME3-203ENST00000563367 NBPF3Q9H094 633 aa33.58■■■□□ 2.97
NME3-203ENST00000563367 FLOT1O75955 427 aa33.57■■■□□ 2.96
NME3-203ENST00000563367 MYCP01106 439 aaPredicted RBP33.57■■■□□ 2.96
NME3-203ENST00000563367 DSG3P32926 999 aa33.57■■■□□ 2.96
NME3-203ENST00000563367 IRF5Q13568 498 aa33.57■■■□□ 2.96
NME3-203ENST00000563367 CENPQQ7L2Z9 268 aaPredicted RBP33.57■■■□□ 2.96
NME3-203ENST00000563367 MKL1Q969V6 931 aa33.57■■■□□ 2.96
NME3-203ENST00000563367 POTEFA5A3E0 1075 aa33.56■■■□□ 2.96
NME3-203ENST00000563367 ORC4O43929 436 aa33.56■■■□□ 2.96
NME3-203ENST00000563367 ADCY3O60266 1144 aa33.56■■■□□ 2.96
NME3-203ENST00000563367 TTLL1O95922 423 aa33.56■■■□□ 2.96
NME3-203ENST00000563367 FAM83BQ5T0W9 1011 aa33.56■■■□□ 2.96
NME3-203ENST00000563367 BRCA2P51587 3418 aa33.56■■■□□ 2.96
NME3-203ENST00000563367 F5H6K3 240 aa33.55■■■□□ 2.96
NME3-203ENST00000563367 NDUFB10O96000 172 aa33.55■■■□□ 2.96
NME3-203ENST00000563367 ELNP15502 786 aa33.55■■■□□ 2.96
NME3-203ENST00000563367 MAPK4P31152 587 aa33.55■■■□□ 2.96
NME3-203ENST00000563367 KLRC3Q07444 240 aa33.55■■■□□ 2.96
NME3-203ENST00000563367 SKAP1Q86WV1 359 aa33.55■■■□□ 2.96
NME3-203ENST00000563367 NUP88Q99567 741 aaPredicted RBP33.55■■■□□ 2.96
NME3-203ENST00000563367 FBXO28Q9NVF7 368 aa33.55■■■□□ 2.96
NME3-203ENST00000563367 TSPY2A6NKD2 308 aa33.54■■■□□ 2.96
NME3-203ENST00000563367 RANBP6O60518 1105 aaKnown RBP33.54■■■□□ 2.96
NME3-203ENST00000563367 LRRC47Q8N1G4 583 aaKnown RBP33.54■■■□□ 2.96
NME3-203ENST00000563367 SLAIN1Q8ND83 568 aa33.54■■■□□ 2.96
NME3-203ENST00000563367 ATG4CQ96DT6 458 aa33.54■■■□□ 2.96
NME3-203ENST00000563367 IL17RBQ9NRM6 502 aa33.54■■■□□ 2.96
NME3-203ENST00000563367 NMT2O60551 498 aa33.53■■■□□ 2.96
NME3-203ENST00000563367 CHMLP26374 656 aa33.53■■■□□ 2.96
NME3-203ENST00000563367 SAMD1Q6SPF0 538 aaPredicted RBP33.53■■■□□ 2.96
NME3-203ENST00000563367 GPR142Q7Z601 462 aa33.53■■■□□ 2.96
NME3-203ENST00000563367 CCNA1P78396 465 aa33.52■■■□□ 2.96
NME3-203ENST00000563367 MTFR1Q15390 333 aa33.52■■■□□ 2.96
NME3-203ENST00000563367 TBC1D10CQ8IV04 446 aa33.52■■■□□ 2.96
NME3-203ENST00000563367 CCAR1Q8IX12 1150 aaKnown RBP33.52■■■□□ 2.96
NME3-203ENST00000563367 PXYLP1Q8TE99 480 aa33.52■■■□□ 2.96
NME3-203ENST00000563367 DSCC1Q9BVC3 393 aa33.52■■■□□ 2.96
NME3-203ENST00000563367 RRP12Q5JTH9 1297 aaKnown RBP33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms