RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 IGDCC4Q8TDY8 1250 aa11.33□□□□□ -0.6
UBFD1-202ENST00000563366 TGFBRAP1Q8WUH2 860 aa11.33□□□□□ -0.6
UBFD1-202ENST00000563366 ZDHHC15Q96MV8 337 aa11.33□□□□□ -0.6
UBFD1-202ENST00000563366 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
UBFD1-202ENST00000563366 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
UBFD1-202ENST00000563366 LTBP3Q9NS15 1303 aa11.33□□□□□ -0.6
UBFD1-202ENST00000563366 HOXA2O43364 376 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
UBFD1-202ENST00000563366 CFHP08603 1231 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 CRKP46108 304 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 RHBDL3P58872 404 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 NIM1KQ8IY84 436 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 ZSCAN10Q96SZ4 725 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-202ENST00000563366 TAOK3Q9H2K8 898 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-202ENST00000563366 HDAC9Q9UKV0 1011 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 MYH6P13533 1939 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 TNKSO95271 1327 aa11.32□□□□□ -0.6
UBFD1-202ENST00000563366 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-202ENST00000563366 PTPDC1A2A3K4 754 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 TSPY2A6NKD2 308 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 F8W031 263 aaPredicted RBP11.31□□□□□ -0.6
UBFD1-202ENST00000563366 BAG4O95429 457 aaKnown RBP11.31□□□□□ -0.6
UBFD1-202ENST00000563366 HLA-DOAP06340 250 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 IARSP41252 1262 aaKnown RBP11.31□□□□□ -0.6
UBFD1-202ENST00000563366 IFIT1BQ5T764 474 aaKnown RBP11.31□□□□□ -0.6
UBFD1-202ENST00000563366 MAPKAPK5Q8IW41 473 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 OGFOD1Q8N543 542 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
UBFD1-202ENST00000563366 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 MKNK2Q9HBH9 465 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 SWAP70Q9UH65 585 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 BRPF3Q9ULD4 1205 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 ZNRF3Q9ULT6 936 aa11.31□□□□□ -0.6
UBFD1-202ENST00000563366 VPS37CA5D8V6 355 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-202ENST00000563366 GOLGA8AA7E2F4 631 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 H3BQV1 296 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 DDAH1O94760 285 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 F13A1P00488 732 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 USP17L8P0C7I0 530 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 RFC5P40937 340 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 CCT2P78371 535 aaKnown RBP11.3□□□□□ -0.6
UBFD1-202ENST00000563366 PKP1Q13835 747 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 C16orf86Q6ZW13 317 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 CATIPQ7Z7H3 387 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 MICU3Q86XE3 530 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 KIAA0825Q8IV33 1275 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 ZNF444Q8N0Y2 327 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-202ENST00000563366 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 ANKK1Q8NFD2 765 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 WASF1Q92558 559 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 DHX36Q9H2U1 1008 aaKnown RBP11.3□□□□□ -0.6
UBFD1-202ENST00000563366 ZSCAN16Q9H4T2 348 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-202ENST00000563366 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 RBM28Q9NW13 759 aaKnown RBP11.3□□□□□ -0.6
UBFD1-202ENST00000563366 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-202ENST00000563366 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 STK36Q9NRP7 1315 aa11.3□□□□□ -0.6
UBFD1-202ENST00000563366 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
UBFD1-202ENST00000563366 CYP2D7A0A087X1C5 515 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
UBFD1-202ENST00000563366 FDX1P10109 184 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 SCNN1DP51172 638 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 RBM5P52756 815 aaKnown RBP eCLIP11.29□□□□□ -0.6
UBFD1-202ENST00000563366 SEC23AQ15436 765 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 IDI2Q9BXS1 227 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 ZMYND15Q9H091 742 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 EHD4Q9H223 541 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 TCP11L1Q9NUJ3 509 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 TMOD2Q9NZR1 351 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
UBFD1-202ENST00000563366 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 WDHD1O75717 1129 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-202ENST00000563366 TSPY3P0CV98 308 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 TSPY8P0CW00 308 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 KIF5BP33176 963 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 TNIP1Q15025 636 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 RTN1Q16799 776 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 PPP2R2DQ66LE6 453 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 MCTP1Q6DN14 999 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 APOBEC3HQ6NTF7 200 aaKnown RBP11.28□□□□□ -0.6
UBFD1-202ENST00000563366 CDC42EP5Q6NZY7 148 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-202ENST00000563366 MAP3K14Q99558 947 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 OSBPL5Q9H0X9 879 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-202ENST00000563366 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
UBFD1-202ENST00000563366 ZNF277Q9NRM2 450 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-202ENST00000563366 BCS1LQ9Y276 419 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 TCHHQ07283 1943 aa11.28□□□□□ -0.6
UBFD1-202ENST00000563366 JAK2O60674 1132 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 ENTPD3O75355 529 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 290 ms