RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 KIF7Q2M1P5 1343 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 SPATA31A5Q5VU36 1347 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 SPATA31A7Q8IWB4 1347 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 LTN1O94822 1766 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 KIAA1324LA8MWY0 1029 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-205ENST00000563283 COBLO75128 1261 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 ADH5P11766 374 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 DRD2P14416 443 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 HDGFL2Q7Z4V5 671 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-205ENST00000563283 SHKBP1Q8TBC3 707 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 PRDM11Q9NQV5 511 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 PCMTD2Q9NV79 361 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 NINLQ9Y2I6 1382 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 KIF20BQ96Q89 1820 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 COL5A2P05997 1499 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-205ENST00000563283 THSD7AQ9UPZ6 1657 aa7.03□□□□□ -1.28
CNOT1-205ENST00000563283 PEAK1Q9H792 1746 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 PRR19A6NJB7 356 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 TREHO43280 583 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 MAPK1P28482 360 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 KCNA1Q09470 495 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 AP3B2Q13367 1082 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 CORO1BQ9BR76 489 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 PANK3Q9H999 370 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 AATKQ6ZMQ8 1374 aa7.02□□□□□ -1.29
CNOT1-205ENST00000563283 SPATA31A1Q5TZJ5 1347 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 WASHC2AQ641Q2 1341 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 RGPD2P0DJD1 1756 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 MED26O95402 600 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 ECEL1O95672 775 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 GRIK1P39086 918 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 USP11P51784 963 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 FAAP100Q0VG06 881 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 INTS5Q6P9B9 1019 aaKnown RBP7.01□□□□□ -1.29
CNOT1-205ENST00000563283 EZH1Q92800 747 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-205ENST00000563283 YIPF2Q9BWQ6 316 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 NLRP2Q9NX02 1062 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 NSD3Q9BZ95 1437 aa7.01□□□□□ -1.29
CNOT1-205ENST00000563283 CCDC7Q96M83 1385 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 PNMA6FA0A0J9YX94 578 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 FAM95CA0A1B0GW59 222 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 ENOX2Q16206 610 aaKnown RBP7□□□□□ -1.29
CNOT1-205ENST00000563283 PAOXQ6QHF9 649 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 PI16Q6UXB8 463 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 KCNH5Q8NCM2 988 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 FBLIM1Q8WUP2 373 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 MFSD14AQ96MC6 490 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 ACTL7BQ9Y614 415 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 MAP3K19Q56UN5 1328 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 SYNGAP1Q96PV0 1343 aa7□□□□□ -1.29
CNOT1-205ENST00000563283 ANKRD26Q9UPS8 1709 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 ZBTB7CA1YPR0 619 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 WDR64B1ANS9 1081 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 XRCC5P13010 732 aaKnown RBP6.99□□□□□ -1.29
CNOT1-205ENST00000563283 SPINK2P20155 84 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 PLCB3Q01970 1234 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 AKAP4Q5JQC9 854 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 DTHD1Q6ZMT9 781 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 BCO2Q9BYV7 579 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 GSX1Q9H4S2 264 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-205ENST00000563283 MAP2P11137 1827 aaKnown RBP6.99□□□□□ -1.29
CNOT1-205ENST00000563283 WNK3Q9BYP7 1800 aa6.99□□□□□ -1.29
CNOT1-205ENST00000563283 F13BP05160 661 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 FCGRTP55899 365 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 FMR1Q06787 632 aaKnown RBP eCLIP6.98□□□□□ -1.292e-7■■□□□ 12.2
CNOT1-205ENST00000563283 PDE3AQ14432 1141 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 RRS1Q15050 365 aaKnown RBP6.98□□□□□ -1.29
CNOT1-205ENST00000563283 NFKBIBQ15653 356 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 CPSF6Q16630 551 aaKnown RBP eCLIP6.98□□□□□ -1.29
CNOT1-205ENST00000563283 GIMAP7Q8NHV1 300 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 IP6K1Q92551 441 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 WDR18Q9BV38 432 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 TRAIPQ9BWF2 469 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 RAD18Q9NS91 495 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 PPP4R2Q9NY27 417 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 USP35Q9P2H5 1018 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 AP4E1Q9UPM8 1137 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 CRB1P82279 1406 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 WDR17Q8IZU2 1322 aa6.98□□□□□ -1.29
CNOT1-205ENST00000563283 ABCC6O95255 1503 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 FAM208AQ9UK61 1670 aaKnown RBP6.97□□□□□ -1.29
CNOT1-205ENST00000563283 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-205ENST00000563283 DISP2A7MBM2 1401 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 AOC2O75106 756 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 HOXC9P31274 260 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 EVA1CP58658 441 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 DTX1Q86Y01 620 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 ZSCAN29Q8IWY8 852 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-205ENST00000563283 FBF1Q8TES7 1133 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 COG3Q96JB2 828 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 ASB16Q96NS5 453 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 KRTAP4-12Q9BQ66 201 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 ACSS3Q9H6R3 686 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 ATG3Q9NT62 314 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 FAM105AQ9NUU6 356 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 PIM2Q9P1W9 311 aa6.97□□□□□ -1.29
CNOT1-205ENST00000563283 PRKAG2Q9UGJ0 569 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms