RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PPP1R9BQ96SB3 815 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 SERPINB13Q9UIV8 391 aa10.84□□□□□ -0.67
LINC00838-201ENST00000562956 PPP6R2O75170 966 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 GOLGA8HP0CJ92 632 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 AKR1B1P15121 316 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 KRT2P35908 639 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 NOVP48745 357 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 HDLBPQ00341 1268 aaKnown RBP10.83□□□□□ -0.68
LINC00838-201ENST00000562956 TCP10Q12799 353 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 RTKN2Q8IZC4 609 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 CABP5Q9NP86 173 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 SERPINA10Q9UK55 444 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 MRVI1Q9Y6F6 885 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 FOCADQ5VW36 1801 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
LINC00838-201ENST00000562956 CYTH3O43739 400 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 KINO60870 393 aaKnown RBP10.83□□□□□ -0.68
LINC00838-201ENST00000562956 SHMT1P34896 483 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 RILPL1Q5EBL4 403 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 ZNF277Q9NRM2 450 aaPredicted RBP10.83□□□□□ -0.68
LINC00838-201ENST00000562956 FAM13BQ9NYF5 915 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 PCDHB6Q9Y5E3 794 aa10.83□□□□□ -0.68
LINC00838-201ENST00000562956 MYH1P12882 1939 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 ADAMTS3O15072 1205 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 CMA1P23946 247 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 NOM1Q5C9Z4 860 aaKnown RBP10.82□□□□□ -0.68
LINC00838-201ENST00000562956 CLEC10AQ8IUN9 316 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 CLIC6Q96NY7 704 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 PSMD1Q99460 953 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.82□□□□□ -0.68
LINC00838-201ENST00000562956 MTMR4Q9NYA4 1195 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 PLIN4Q96Q06 1357 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.82□□□□□ -0.68
LINC00838-201ENST00000562956 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
LINC00838-201ENST00000562956 ATP2B1P20020 1258 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 GNAQP50148 359 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 SHC4Q6S5L8 630 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 GPKOWQ92917 476 aaPredicted RBP eCLIP10.82□□□□□ -0.68
LINC00838-201ENST00000562956 TNFRSF25Q93038 417 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 CPVLQ9H3G5 476 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 SWAP70Q9UH65 585 aa10.82□□□□□ -0.68
LINC00838-201ENST00000562956 ATF5Q9Y2D1 282 aaPredicted RBP10.82□□□□□ -0.68
LINC00838-201ENST00000562956 ZNF646O15015 1829 aaPredicted RBP10.82□□□□□ -0.68
LINC00838-201ENST00000562956 IGKV6D-41A0A0C4DH26 115 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 DDTLA6NHG4 134 aaPredicted RBP10.81□□□□□ -0.68
LINC00838-201ENST00000562956 HLA-DOAP06340 250 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 PFKFB1P16118 471 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 EIF6P56537 245 aaKnown RBP10.81□□□□□ -0.68
LINC00838-201ENST00000562956 GRIPAP1Q4V328 841 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 USP17L2Q6R6M4 530 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 JMYQ8N9B5 988 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 IDI2Q9BXS1 227 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 DNAJC18Q9H819 358 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 KLRF2D3W0D1 207 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 RAD17O75943 681 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 NLRP5P59047 1200 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 CFAP100Q494V2 611 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 SH3BP5LQ7L8J4 393 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 LARGE2Q8N3Y3 721 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 ERCC4Q92889 916 aaPredicted RBP10.81□□□□□ -0.68
LINC00838-201ENST00000562956 PDLIM2Q96JY6 352 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 TDRD3Q9H7E2 651 aaKnown RBP10.81□□□□□ -0.68
LINC00838-201ENST00000562956 COL4A5P29400 1685 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 FAM196BA6NMK8 535 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 USP17L5A8MUK1 530 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 WNT7AO00755 349 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 CTAGE5O15320 804 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 ZNF202O95125 648 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 PARP1P09874 1014 aaKnown RBP10.81□□□□□ -0.68
LINC00838-201ENST00000562956 UVSSAQ2YD98 709 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 ANO6Q4KMQ2 910 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 TYW1BQ6NUM6 668 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 SASS6Q6UVJ0 657 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 EHD4Q9H223 541 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 BRMS1Q9HCU9 246 aa10.81□□□□□ -0.68
LINC00838-201ENST00000562956 GRIN1Q05586 938 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 LRRC47Q8N1G4 583 aaKnown RBP10.8□□□□□ -0.68
LINC00838-201ENST00000562956 KRI1Q8N9T8 703 aaKnown RBP10.8□□□□□ -0.68
LINC00838-201ENST00000562956 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
LINC00838-201ENST00000562956 PSMD14O00487 310 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 CUTAO60888 179 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 RESP18Q5W5W9 173 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 WWC2Q6AWC2 1192 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 RSBN1LQ6PCB5 846 aaPredicted RBP10.8□□□□□ -0.68
LINC00838-201ENST00000562956 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 LZTS2Q9BRK4 669 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 SDF4Q9BRK5 362 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 DHX36Q9H2U1 1008 aaKnown RBP10.8□□□□□ -0.68
LINC00838-201ENST00000562956 CLIP2Q9UDT6 1046 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 FBXO2Q9UK22 296 aaPredicted RBP10.8□□□□□ -0.68
LINC00838-201ENST00000562956 HPSEQ9Y251 543 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 MYO3BQ8WXR4 1341 aa10.8□□□□□ -0.68
LINC00838-201ENST00000562956 A0A087WWV3 80 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 MPHOSPH10O00566 681 aaKnown RBP10.79□□□□□ -0.68
LINC00838-201ENST00000562956 PDHBP11177 359 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 SHROOM1Q2M3G4 852 aaPredicted RBP10.79□□□□□ -0.68
LINC00838-201ENST00000562956 SPECC1Q5M775 1068 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 ZSCAN29Q8IWY8 852 aaPredicted RBP10.79□□□□□ -0.68
LINC00838-201ENST00000562956 FAM200AQ8TCP9 573 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms