RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 RABGAP1Q9Y3P9 1069 aa10.57□□□□□ -0.72
CYLD-204ENST00000562884 CCDC171Q6TFL3 1326 aa10.57□□□□□ -0.72
CYLD-204ENST00000562884 MYPNQ86TC9 1320 aa10.57□□□□□ -0.72
CYLD-204ENST00000562884 ZSWIM8A7E2V4 1837 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 WDR46O15213 610 aaKnown RBP10.56□□□□□ -0.72
CYLD-204ENST00000562884 TSPY3P0CV98 308 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 TSPY8P0CW00 308 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 PCP11498 1178 aaKnown RBP10.56□□□□□ -0.72
CYLD-204ENST00000562884 EEF2P13639 858 aaKnown RBP10.56□□□□□ -0.72
CYLD-204ENST00000562884 MAPK4P31152 587 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 RGS19P49795 217 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 TTC22Q5TAA0 569 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 CCDC129Q6ZRS4 1044 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 MB21D1Q8N884 522 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 RUFY2Q8WXA3 655 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 ARHGAP39Q9C0H5 1083 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 RPAP3Q9H6T3 665 aaPredicted RBP10.56□□□□□ -0.72
CYLD-204ENST00000562884 VCPKMTQ9H867 229 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 PTCH2Q9Y6C5 1203 aa10.56□□□□□ -0.72
CYLD-204ENST00000562884 RBBP6Q7Z6E9 1792 aaKnown RBP10.56□□□□□ -0.72
CYLD-204ENST00000562884 ZNFX1Q9P2E3 1918 aaKnown RBP10.55□□□□□ -0.72
CYLD-204ENST00000562884 A0A0D9SFI3 127 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 A0A1W2PRG0 241 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 FGAP02671 866 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 HSPD1P10809 573 aaKnown RBP10.55□□□□□ -0.72
CYLD-204ENST00000562884 CAPN2P17655 700 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 ERVK-24P63145 666 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 ATP2B2Q01814 1243 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 IRF5Q13568 498 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 CENPQQ7L2Z9 268 aaPredicted RBP10.55□□□□□ -0.72
CYLD-204ENST00000562884 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 NEDD1Q8NHV4 660 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 PXYLP1Q8TE99 480 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 MKL1Q969V6 931 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 TMEM106CQ9BVX2 250 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 TANGO6Q9C0B7 1094 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 PARP14Q460N5 1801 aa10.55□□□□□ -0.72
CYLD-204ENST00000562884 RLFQ13129 1914 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 PLIN4Q96Q06 1357 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 ORC4O43929 436 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 TTLL1O95922 423 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 PDE4AP27815 886 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 CTGFP29279 349 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 GRK4P32298 578 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 UBXN2AP68543 259 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 CAP1Q01518 475 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 CWC27Q6UX04 472 aaKnown RBP10.54□□□□□ -0.72
CYLD-204ENST00000562884 SIAH1Q8IUQ4 282 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 TRMT44Q8IYL2 757 aaKnown RBP10.54□□□□□ -0.72
CYLD-204ENST00000562884 STK11IPQ8N1F8 1099 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 ZNF333Q96JL9 665 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 RNF41Q9H4P4 317 aaPredicted RBP10.54□□□□□ -0.72
CYLD-204ENST00000562884 CWC22Q9HCG8 908 aaKnown RBP10.54□□□□□ -0.72
CYLD-204ENST00000562884 MTMR4Q9NYA4 1195 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 CTNNA3Q9UI47 895 aa10.54□□□□□ -0.72
CYLD-204ENST00000562884 IGKV6D-41A0A0C4DH26 115 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 TSPY2A6NKD2 308 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 SMIM22K7EJ46 135 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 FOXP2O15409 715 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 ADCY3O60266 1144 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 PRDM1O75626 825 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 FLOT1O75955 427 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 FGRP09769 529 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 FLT3LGP49771 235 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 TFAP4Q01664 338 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 MLLT1Q03111 559 aaPredicted RBP10.53□□□□□ -0.72
CYLD-204ENST00000562884 PRKCZQ05513 592 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 ZNF589Q86UQ0 364 aaPredicted RBP10.53□□□□□ -0.72
CYLD-204ENST00000562884 SOCS4Q8WXH5 440 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 NUDT12Q9BQG2 462 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 DSCC1Q9BVC3 393 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
CYLD-204ENST00000562884 BIN2Q9UBW5 565 aaPredicted RBP10.53□□□□□ -0.72
CYLD-204ENST00000562884 CLIP2Q9UDT6 1046 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.53□□□□□ -0.72
CYLD-204ENST00000562884 RAD50Q92878 1312 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 HTTP42858 3142 aa10.53□□□□□ -0.72
CYLD-204ENST00000562884 COL11A1P12107 1806 aaPredicted RBP10.52□□□□□ -0.73
CYLD-204ENST00000562884 LAMA4Q16363 1823 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
CYLD-204ENST00000562884 F5H6K3 240 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 ZNF213O14771 459 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 RANBP6O60518 1105 aaKnown RBP10.52□□□□□ -0.73
CYLD-204ENST00000562884 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.73
CYLD-204ENST00000562884 XRCC5P13010 732 aaKnown RBP10.52□□□□□ -0.73
CYLD-204ENST00000562884 COPB2P35606 906 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 KLRC3Q07444 240 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 CCDC178Q5BJE1 867 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 PLEKHH3Q7Z736 793 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 SPICE1Q8N0Z3 855 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 GMCL1P1Q8NEA9 526 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 NKX2-3Q8TAU0 364 aa10.52□□□□□ -0.73
CYLD-204ENST00000562884 CEP95Q96GE4 821 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms