RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 KCNH3Q9ULD8 1083 aa7.71□□□□□ -1.18
CHD9-206ENST00000562791 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.18
CHD9-206ENST00000562791 FARP2O94887 1054 aaPredicted RBP7.7□□□□□ -1.18
CHD9-206ENST00000562791 ATE1O95260 518 aa7.7□□□□□ -1.18
CHD9-206ENST00000562791 POLR2BP30876 1174 aaKnown RBP7.7□□□□□ -1.18
CHD9-206ENST00000562791 HK2P52789 917 aa7.7□□□□□ -1.18
CHD9-206ENST00000562791 JAG1P78504 1218 aa7.7□□□□□ -1.18
CHD9-206ENST00000562791 MLANAQ16655 118 aa7.7□□□□□ -1.18
CHD9-206ENST00000562791 SEZ6Q53EL9 994 aa7.7□□□□□ -1.18
CHD9-206ENST00000562791 TMEM87AQ8NBN3 555 aa7.7□□□□□ -1.18
CHD9-206ENST00000562791 GMIPQ9P107 970 aa7.7□□□□□ -1.18
CHD9-206ENST00000562791 PCDHA11Q9Y5I1 949 aa7.7□□□□□ -1.18
CHD9-206ENST00000562791 ARID1BQ8NFD5 2236 aaPredicted RBP7.7□□□□□ -1.18
CHD9-206ENST00000562791 RGS13O14921 159 aa7.69□□□□□ -1.18
CHD9-206ENST00000562791 GBP1P32455 592 aa7.69□□□□□ -1.18
CHD9-206ENST00000562791 MFAP1P55081 439 aaKnown RBP7.69□□□□□ -1.18
CHD9-206ENST00000562791 CLCQ05315 142 aa7.69□□□□□ -1.18
CHD9-206ENST00000562791 EGR3Q06889 387 aa7.69□□□□□ -1.18
CHD9-206ENST00000562791 GK5Q6ZS86 529 aa7.69□□□□□ -1.18
CHD9-206ENST00000562791 RBM47A0AV96 593 aaKnown RBP7.68□□□□□ -1.18
CHD9-206ENST00000562791 ZBTB7CA1YPR0 619 aa7.68□□□□□ -1.18
CHD9-206ENST00000562791 RAG1P15918 1043 aa7.68□□□□□ -1.18
CHD9-206ENST00000562791 LTKP29376 864 aa7.68□□□□□ -1.18
CHD9-206ENST00000562791 APOBRQ0VD83 1088 aa7.68□□□□□ -1.18
CHD9-206ENST00000562791 PRR23BQ6ZRT6 265 aa7.68□□□□□ -1.18
CHD9-206ENST00000562791 ANTXR1Q9H6X2 564 aa7.68□□□□□ -1.18
CHD9-206ENST00000562791 EHMT1Q9H9B1 1298 aa7.68□□□□□ -1.18
CHD9-206ENST00000562791 SP110Q9HB58 689 aa7.68□□□□□ -1.18
CHD9-206ENST00000562791 BTBD11A6QL63 1104 aa7.67□□□□□ -1.18
CHD9-206ENST00000562791 HPXP02790 462 aa7.67□□□□□ -1.18
CHD9-206ENST00000562791 TRHRP34981 398 aaPredicted RBP7.67□□□□□ -1.18
CHD9-206ENST00000562791 TMEM67Q5HYA8 995 aa7.67□□□□□ -1.18
CHD9-206ENST00000562791 CCDC120Q96HB5 630 aa7.67□□□□□ -1.18
CHD9-206ENST00000562791 EAF1Q96JC9 268 aaPredicted RBP7.67□□□□□ -1.18
CHD9-206ENST00000562791 BACH2Q9BYV9 841 aa7.67□□□□□ -1.18
CHD9-206ENST00000562791 ZGLP1P0C6A0 271 aa7.66□□□□□ -1.18
CHD9-206ENST00000562791 FANCCQ00597 558 aa7.66□□□□□ -1.18
CHD9-206ENST00000562791 SNW1Q13573 536 aaKnown RBP7.66□□□□□ -1.18
CHD9-206ENST00000562791 MLECQ14165 292 aa7.66□□□□□ -1.18
CHD9-206ENST00000562791 CDCP2Q5VXM1 449 aa7.66□□□□□ -1.18
CHD9-206ENST00000562791 MPZL3Q6UWV2 235 aa7.66□□□□□ -1.18
CHD9-206ENST00000562791 ATG4CQ96DT6 458 aa7.66□□□□□ -1.18
CHD9-206ENST00000562791 CNNM2Q9H8M5 875 aa7.66□□□□□ -1.18
CHD9-206ENST00000562791 PCDHGB7Q9Y5F8 929 aa7.66□□□□□ -1.18
CHD9-206ENST00000562791 MCM4P33991 863 aa7.65□□□□□ -1.18
CHD9-206ENST00000562791 TEKQ02763 1124 aa7.65□□□□□ -1.18
CHD9-206ENST00000562791 SLITRK4Q8IW52 837 aa7.65□□□□□ -1.18
CHD9-206ENST00000562791 ABHD4Q8TB40 342 aa7.65□□□□□ -1.18
CHD9-206ENST00000562791 ZNF512BQ96KM6 892 aaPredicted RBP7.65□□□□□ -1.18
CHD9-206ENST00000562791 NT5C1AQ9BXI3 368 aa7.65□□□□□ -1.18
CHD9-206ENST00000562791 HDAC8Q9BY41 377 aa7.65□□□□□ -1.18
CHD9-206ENST00000562791 FAM53CQ9NYF3 392 aa7.65□□□□□ -1.18
CHD9-206ENST00000562791 EBF1Q9UH73 591 aa7.65□□□□□ -1.18
CHD9-206ENST00000562791 RAC2P15153 192 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 ZNF76P36508 570 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 NMIQ13287 307 aaPredicted RBP7.64□□□□□ -1.19
CHD9-206ENST00000562791 FZD5Q13467 585 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 TIGD5Q53EQ6 642 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 ZNF394Q53GI3 561 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 NBPF12Q5TAG4 269 aaPredicted RBP7.64□□□□□ -1.19
CHD9-206ENST00000562791 NLRC3Q7RTR2 1065 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 TMC3Q7Z5M5 1100 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 KIAA0825Q8IV33 1275 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 KSR1Q8IVT5 923 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 REXO1Q8N1G1 1221 aaKnown RBP7.64□□□□□ -1.19
CHD9-206ENST00000562791 MYLIPQ8WY64 445 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 NKD1Q969G9 470 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 FAM84AQ96KN4 292 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 DIRC2Q96SL1 478 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 SPON2Q9BUD6 331 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 C19orf44Q9H6X5 657 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 KCNK12Q9HB15 430 aa7.64□□□□□ -1.19
CHD9-206ENST00000562791 MEIS3P2A8K0S8 358 aa7.63□□□□□ -1.19
CHD9-206ENST00000562791 RECKO95980 971 aa7.63□□□□□ -1.19
CHD9-206ENST00000562791 CLEC16AQ2KHT3 1053 aa7.63□□□□□ -1.19
CHD9-206ENST00000562791 RNF32Q9H0A6 362 aa7.63□□□□□ -1.19
CHD9-206ENST00000562791 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.63□□□□□ -1.19
CHD9-206ENST00000562791 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
CHD9-206ENST00000562791 NME1P15531 152 aaKnown RBP7.62□□□□□ -1.19
CHD9-206ENST00000562791 RNF4P78317 190 aa7.62□□□□□ -1.19
CHD9-206ENST00000562791 NBPF9Q3BBW0 867 aa7.62□□□□□ -1.19
CHD9-206ENST00000562791 USP48Q86UV5 1035 aa7.62□□□□□ -1.19
CHD9-206ENST00000562791 TMEM192Q8IY95 271 aa7.62□□□□□ -1.19
CHD9-206ENST00000562791 PDZD8Q8NEN9 1154 aa7.62□□□□□ -1.19
CHD9-206ENST00000562791 SYTL5Q8TDW5 730 aaPredicted RBP7.62□□□□□ -1.19
CHD9-206ENST00000562791 NSUN3Q9H649 340 aaKnown RBP7.62□□□□□ -1.19
CHD9-206ENST00000562791 MINPP1Q9UNW1 487 aa7.62□□□□□ -1.19
CHD9-206ENST00000562791 TNFRSF10CO14798 259 aa7.61□□□□□ -1.19
CHD9-206ENST00000562791 ZNF165P49910 485 aa7.61□□□□□ -1.19
CHD9-206ENST00000562791 CHMP4BP1P59074 171 aa7.61□□□□□ -1.19
CHD9-206ENST00000562791 SLC38A3Q99624 504 aa7.61□□□□□ -1.19
CHD9-206ENST00000562791 G6PC3Q9BUM1 346 aa7.61□□□□□ -1.19
CHD9-206ENST00000562791 ZNF281Q9Y2X9 895 aa7.61□□□□□ -1.19
CHD9-206ENST00000562791 KRT1P04264 644 aa7.6□□□□□ -1.19
CHD9-206ENST00000562791 PKN1Q16512 942 aa7.6□□□□□ -1.19
CHD9-206ENST00000562791 CILP2Q8IUL8 1156 aa7.6□□□□□ -1.19
CHD9-206ENST00000562791 USHBP1Q8N6Y0 703 aa7.6□□□□□ -1.19
CHD9-206ENST00000562791 SLC6A18Q96N87 628 aa7.6□□□□□ -1.19
CHD9-206ENST00000562791 FOXP3Q9BZS1 431 aa7.6□□□□□ -1.19
CHD9-206ENST00000562791 METTL5Q9NRN9 209 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms