RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 MAD2L2Q9UI95 211 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 GUCY1A2P33402 732 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 FOSBP53539 338 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 HIRAP54198 1017 aaPredicted RBP16.3■□□□□ 0.2
SPG7-206ENST00000562775 RRP1BQ14684 758 aaKnown RBP16.3■□□□□ 0.2
SPG7-206ENST00000562775 SEPT2Q15019 361 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
SPG7-206ENST00000562775 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
SPG7-206ENST00000562775 CNTNAP5Q8WYK1 1306 aa16.29■□□□□ 0.2
SPG7-206ENST00000562775 GH2P01242 217 aa16.29■□□□□ 0.2
SPG7-206ENST00000562775 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
SPG7-206ENST00000562775 EEF2P13639 858 aaKnown RBP16.29■□□□□ 0.2
SPG7-206ENST00000562775 GUCY1B3Q02153 619 aa16.29■□□□□ 0.2
SPG7-206ENST00000562775 RESTQ13127 1097 aa16.29■□□□□ 0.2
SPG7-206ENST00000562775 MIGA2Q7L4E1 593 aa16.29■□□□□ 0.2
SPG7-206ENST00000562775 LRRC47Q8N1G4 583 aaKnown RBP16.29■□□□□ 0.2
SPG7-206ENST00000562775 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
SPG7-206ENST00000562775 L3MBTL3Q96JM7 780 aaPredicted RBP16.29■□□□□ 0.2
SPG7-206ENST00000562775 AIFM3Q96NN9 605 aa16.29■□□□□ 0.2
SPG7-206ENST00000562775 RBM27Q9P2N5 1060 aaKnown RBP16.29■□□□□ 0.2
SPG7-206ENST00000562775 SCAF8Q9UPN6 1271 aaKnown RBP16.29■□□□□ 0.2
SPG7-206ENST00000562775 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 PDHBP11177 359 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 PTMSP20962 102 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 JAG1P78504 1218 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 ICA1Q05084 483 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 TRIM29Q14134 588 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 SHROOM1Q2M3G4 852 aaPredicted RBP16.28■□□□□ 0.2
SPG7-206ENST00000562775 KRT40Q6A162 431 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 MCTP1Q6DN14 999 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 GGA3Q9NZ52 723 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 MTMR7Q9Y216 660 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 V9GY48 417 aaPredicted RBP16.28■□□□□ 0.2
SPG7-206ENST00000562775 MYH4Q9Y623 1939 aa16.28■□□□□ 0.2
SPG7-206ENST00000562775 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 UBE2Q2LH0YL09 131 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 SMARCA1P28370 1054 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 PKN1Q16512 942 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 ASPRV1Q53RT3 343 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 OTUD7BQ6GQQ9 843 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 SIAH1Q8IUQ4 282 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 HOOK2Q96ED9 719 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 SYNPO2Q9UMS6 1093 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 PPP2R3BQ9Y5P8 575 aa16.27■□□□□ 0.2
SPG7-206ENST00000562775 MYH6P13533 1939 aa16.27■□□□□ 0.19
SPG7-206ENST00000562775 GLTPD2A6NH11 291 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 USP17L5A8MUK1 530 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 KLRF2D3W0D1 207 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 CAP2P40123 477 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 FOXD4L6Q3SYB3 417 aaPredicted RBP16.26■□□□□ 0.19
SPG7-206ENST00000562775 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 FOXD4L3Q6VB84 417 aaPredicted RBP16.26■□□□□ 0.19
SPG7-206ENST00000562775 CHAMP1Q96JM3 812 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 GJB4Q9NTQ9 266 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 GOLGA8HP0CJ92 632 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 XBP1P17861 261 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 NBPF12Q5TAG4 269 aaPredicted RBP16.26■□□□□ 0.19
SPG7-206ENST00000562775 SPZ1Q9BXG8 430 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 GINM1Q9NU53 330 aa16.26■□□□□ 0.19
SPG7-206ENST00000562775 PHF20L1A8MW92 1017 aa16.25■□□□□ 0.19
SPG7-206ENST00000562775 ASNSP08243 561 aa16.25■□□□□ 0.19
SPG7-206ENST00000562775 DNM1Q05193 864 aaKnown RBP16.25■□□□□ 0.19
SPG7-206ENST00000562775 ZNF543Q08ER8 600 aa16.25■□□□□ 0.19
SPG7-206ENST00000562775 GPATCH4Q5T3I0 446 aaKnown RBP16.25■□□□□ 0.19
SPG7-206ENST00000562775 DCAF15Q66K64 600 aa16.25■□□□□ 0.19
SPG7-206ENST00000562775 RASGRP2Q7LDG7 609 aa16.25■□□□□ 0.19
SPG7-206ENST00000562775 hCG_1642624A0A1W2PR95 340 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 CYTH3O43739 400 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 SCG2P13521 617 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 KIF23Q02241 960 aaPredicted RBP16.24■□□□□ 0.19
SPG7-206ENST00000562775 PFKFB3Q16875 520 aaPredicted RBP16.24■□□□□ 0.19
SPG7-206ENST00000562775 SLC35G1Q2M3R5 365 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 FAM173BQ6P4H8 233 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 USP50Q70EL3 339 aaPredicted RBP16.24■□□□□ 0.19
SPG7-206ENST00000562775 BRAPQ7Z569 592 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 GMCL1P1Q8NEA9 526 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 ARHGEF10LQ9HCE6 1279 aa16.24■□□□□ 0.19
SPG7-206ENST00000562775 F5H6K3 240 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 CTNND1O60716 968 aaKnown RBP16.23■□□□□ 0.19
SPG7-206ENST00000562775 MMP1P03956 469 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 KRT85P78386 507 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 KLRC3Q07444 240 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 SAFBQ15424 915 aaKnown RBP eCLIP16.23■□□□□ 0.19
SPG7-206ENST00000562775 SLFN13Q68D06 897 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 DCPSQ96C86 337 aaKnown RBP16.23■□□□□ 0.19
SPG7-206ENST00000562775 ZNF341Q9BYN7 854 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 RIOX1Q9H6W3 641 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 LMBRD1Q9NUN5 540 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 CNPY2Q9Y2B0 182 aa16.23■□□□□ 0.19
SPG7-206ENST00000562775 FRMPD2Q68DX3 1309 aaPredicted RBP16.23■□□□□ 0.19
SPG7-206ENST00000562775 BAZ2BQ9UIF8 2168 aaKnown RBP16.22■□□□□ 0.19
SPG7-206ENST00000562775 TCHHQ07283 1943 aa16.22■□□□□ 0.19
SPG7-206ENST00000562775 NCLP19338 710 aaKnown RBP16.22■□□□□ 0.19
SPG7-206ENST00000562775 EPHX2P34913 555 aa16.22■□□□□ 0.19
SPG7-206ENST00000562775 SUPT20HL1Q3ZLR7 823 aa16.22■□□□□ 0.19
SPG7-206ENST00000562775 ATL3Q6DD88 541 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms