RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 PCNTO95613 3336 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 ECM29Q5VYK3 1845 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 ZNF609O15014 1411 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 CLRN2A0PK11 232 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 FIGNL2A6NMB9 653 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 ATP1A2P50993 1020 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 FKBP1AP62942 108 aaKnown RBP7.13□□□□□ -1.27
CDH13-206ENST00000562601 GRM1Q13255 1194 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
CDH13-206ENST00000562601 USP17L2Q6R6M4 530 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 PI16Q6UXB8 463 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 TBC1D9Q6ZT07 1266 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 LYSMD3Q7Z3D4 306 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 CRBNQ96SW2 442 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 ESYT1Q9BSJ8 1104 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 CCDC8Q9H0W5 538 aaPredicted RBP7.13□□□□□ -1.27
CDH13-206ENST00000562601 IL1RAPL2Q9NP60 686 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 GNL3LQ9NVN8 582 aaKnown RBP7.13□□□□□ -1.27
CDH13-206ENST00000562601 TLR7Q9NYK1 1049 aaKnown RBP7.13□□□□□ -1.27
CDH13-206ENST00000562601 ABT1Q9ULW3 272 aaKnown RBP7.13□□□□□ -1.27
CDH13-206ENST00000562601 NOP58Q9Y2X3 529 aaKnown RBP7.13□□□□□ -1.27
CDH13-206ENST00000562601 MYH2Q9UKX2 1941 aa7.13□□□□□ -1.27
CDH13-206ENST00000562601 MYO5AQ9Y4I1 1855 aaKnown RBP7.13□□□□□ -1.27
CDH13-206ENST00000562601 SOBPA7XYQ1 873 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 SMARCA5O60264 1052 aaPredicted RBP7.12□□□□□ -1.27
CDH13-206ENST00000562601 CRKP46108 304 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 NFX1Q12986 1120 aaKnown RBP7.12□□□□□ -1.27
CDH13-206ENST00000562601 RASGRF1Q13972 1273 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 PRKG1Q13976 671 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 TNNI3KQ59H18 835 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 MOB2Q70IA6 237 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 HOMEZQ8IX15 550 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 RPAP2Q8IXW5 612 aaPredicted RBP7.12□□□□□ -1.27
CDH13-206ENST00000562601 TBC1D22AQ8WUA7 517 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 EAF2Q96CJ1 260 aaPredicted RBP7.12□□□□□ -1.27
CDH13-206ENST00000562601 CDCA5Q96FF9 252 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 ZBED3Q96IU2 234 aaPredicted RBP7.12□□□□□ -1.27
CDH13-206ENST00000562601 DBNDD2Q9BQY9 259 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 TDRD3Q9H7E2 651 aaKnown RBP7.12□□□□□ -1.27
CDH13-206ENST00000562601 VEZTQ9HBM0 779 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 RAB6BQ9NRW1 208 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 DENND2AQ9ULE3 1009 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 FZD1Q9UP38 647 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 FPGT-TNNI3KV9GXZ4 949 aa7.12□□□□□ -1.27
CDH13-206ENST00000562601 AKAP11Q9UKA4 1901 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 TERTO14746 1132 aaKnown RBP7.11□□□□□ -1.27
CDH13-206ENST00000562601 LDHBP07195 334 aaKnown RBP7.11□□□□□ -1.27
CDH13-206ENST00000562601 PRDX5P30044 214 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 VEGFBP49765 207 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 CACNB3P54284 484 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 IRX6P78412 446 aaPredicted RBP7.11□□□□□ -1.27
CDH13-206ENST00000562601 DEFB115Q30KQ5 88 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 TTC39AQ5SRH9 613 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 AACSQ86V21 672 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 DEPDC4Q8N2C3 294 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 WDR66Q8TBY9 1149 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 RHPN1Q8TCX5 695 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 KLRG1Q96E93 195 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 PPP1R12CQ9BZL4 782 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 CHMP4BQ9H444 224 aaKnown RBP7.11□□□□□ -1.27
CDH13-206ENST00000562601 HMG20BQ9P0W2 317 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 ZNF70Q9UC06 446 aaPredicted RBP7.11□□□□□ -1.27
CDH13-206ENST00000562601 ABCF2Q9UG63 623 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 SERPINA10Q9UK55 444 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 SUPT16HQ9Y5B9 1047 aaKnown RBP7.11□□□□□ -1.27
CDH13-206ENST00000562601 AK9Q5TCS8 1911 aa7.11□□□□□ -1.27
CDH13-206ENST00000562601 PALM3A6NDB9 673 aaPredicted RBP7.1□□□□□ -1.27
CDH13-206ENST00000562601 TCP10L2B9ZVM9 353 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 MYO1BO43795 1136 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 AOC2O75106 756 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 HMMRO75330 724 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 IL2RAP01589 272 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 INHAP05111 366 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 MCAMP43121 646 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 MMP14P50281 582 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 GDF10P55107 478 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 PTSQ03393 145 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 CCDC158Q5M9N0 1113 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 ERC1Q8IUD2 1116 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 C2orf69Q8N8R5 385 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 SPATA5Q8NB90 893 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 TEKT1Q969V4 418 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 GRIP2Q9C0E4 1043 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 DEFB129Q9H1M3 183 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 ETNK1Q9HBU6 452 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 GBA2Q9HCG7 927 aaPredicted RBP7.1□□□□□ -1.27
CDH13-206ENST00000562601 GPR108Q9NPR9 543 aa7.1□□□□□ -1.27
CDH13-206ENST00000562601 TFIP11Q9UBB9 837 aaKnown RBP7.1□□□□□ -1.27
CDH13-206ENST00000562601 DBNLQ9UJU6 430 aaKnown RBP7.1□□□□□ -1.27
CDH13-206ENST00000562601 MAFBQ9Y5Q3 323 aaPredicted RBP7.1□□□□□ -1.27
CDH13-206ENST00000562601 CNTNAP1P78357 1384 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 PITPNM2Q9BZ72 1349 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 UBE2Q2LH0YL09 131 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 BACH1O14867 736 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 UQCRFS1P1P0C7P4 283 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 ARID4AP29374 1257 aaPredicted RBP7.09□□□□□ -1.27
CDH13-206ENST00000562601 HUNKP57058 714 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 CENPCQ03188 943 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 HSP90AB4PQ58FF6 505 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms