RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 NOL8Q76FK4 1167 aaKnown RBP12.31□□□□□ -0.44
VAC14-203ENST00000561879 SH3BP5LQ7L8J4 393 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 ZFPM1Q8IX07 1006 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 CHMP5Q9NZZ3 219 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 HERC5Q9UII4 1024 aaKnown RBP12.31□□□□□ -0.44
VAC14-203ENST00000561879 BRPF3Q9ULD4 1205 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 BAZ2AQ9UIF9 1905 aaKnown RBP12.31□□□□□ -0.44
VAC14-203ENST00000561879 FOCADQ5VW36 1801 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 DDTLA6NHG4 134 aaPredicted RBP12.3□□□□□ -0.44
VAC14-203ENST00000561879 CCDC69A6NI79 296 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 SNPHO15079 494 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 LARGE1O95461 756 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 TSPY3P0CV98 308 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 TSPY8P0CW00 308 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 PTPREP23469 700 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 CACNB3P54284 484 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 MAP3K10Q02779 954 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 TCP10Q12799 353 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 SKIV2LQ15477 1246 aaKnown RBP12.3□□□□□ -0.44
VAC14-203ENST00000561879 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 APOA5Q6Q788 366 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 ENAHQ8N8S7 591 aaPredicted RBP12.3□□□□□ -0.44
VAC14-203ENST00000561879 TSKSQ9UJT2 592 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 SLC12A7Q9Y666 1083 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 DICER1Q9UPY3 1922 aaKnown RBP12.3□□□□□ -0.44
VAC14-203ENST00000561879 DDX60LQ5H9U9 1706 aaKnown RBP12.3□□□□□ -0.44
VAC14-203ENST00000561879 TNKSO95271 1327 aa12.3□□□□□ -0.44
VAC14-203ENST00000561879 CCDC196A0A1B0GTZ2 297 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 CLRN2A0PK11 232 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 ZBTB43O43298 467 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 CALM1P0DP23 149 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 CALM2P0DP24 149 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 CALM3P0DP25 149 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 NUCB2P80303 420 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 ST3GAL1Q11201 340 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 SCRN1Q12765 414 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 IFIT1BQ5T764 474 aaKnown RBP12.29□□□□□ -0.44
VAC14-203ENST00000561879 NFXL1Q6ZNB6 911 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 CCDC83Q8IWF9 413 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 ZSCAN29Q8IWY8 852 aaPredicted RBP12.29□□□□□ -0.44
VAC14-203ENST00000561879 NECAB1Q8N987 351 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 MAP3K14Q99558 947 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 IL17RBQ9NRM6 502 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 PGAP2Q9UHJ9 254 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 HPS5Q9UPZ3 1129 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 SMC3Q9UQE7 1217 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 SBF1O95248 1867 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 NAV1Q8NEY1 1877 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 CNTNAP1P78357 1384 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 NID2Q14112 1375 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 PLIN4Q96Q06 1357 aa12.29□□□□□ -0.44
VAC14-203ENST00000561879 LAMB1P07942 1786 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 SHTN1A0MZ66 631 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 RCCD1A6NED2 376 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 TCP10L2B9ZVM9 353 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 DDNO94850 711 aaPredicted RBP12.28□□□□□ -0.44
VAC14-203ENST00000561879 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
VAC14-203ENST00000561879 SHMT1P34896 483 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 HMGN5P82970 282 aaKnown RBP12.28□□□□□ -0.44
VAC14-203ENST00000561879 FAM47AQ5JRC9 791 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 CATIPQ7Z7H3 387 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 CRACR2BQ8N4Y2 399 aaPredicted RBP12.28□□□□□ -0.44
VAC14-203ENST00000561879 RGS22Q8NE09 1264 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 SMARCC2Q8TAQ2 1214 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 ZKSCAN3Q9BRR0 538 aa12.28□□□□□ -0.44
VAC14-203ENST00000561879 ADARB2Q9NS39 739 aaKnown RBP12.28□□□□□ -0.44
VAC14-203ENST00000561879 ECM29Q5VYK3 1845 aa12.27□□□□□ -0.44
VAC14-203ENST00000561879 MYH1P12882 1939 aa12.27□□□□□ -0.44
VAC14-203ENST00000561879 IGKV6D-41A0A0C4DH26 115 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 GOLGA8BA8MQT2 603 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 DDAH1O94760 285 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 EGFRP00533 1210 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 PDCP20941 246 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
VAC14-203ENST00000561879 STK3Q13188 491 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 SLC4A8Q2Y0W8 1093 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.45
VAC14-203ENST00000561879 CPLX2Q6PUV4 134 aaKnown RBP12.27□□□□□ -0.45
VAC14-203ENST00000561879 APOBEC3FQ8IUX4 373 aaKnown RBP12.27□□□□□ -0.45
VAC14-203ENST00000561879 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 CSRNP1Q96S65 589 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.27□□□□□ -0.45
VAC14-203ENST00000561879 TRIM34Q9BYJ4 488 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 VEZTQ9HBM0 779 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 SENP2Q9HC62 589 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 KIF3AQ9Y496 699 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 ADAMTSL1Q8N6G6 1762 aa12.27□□□□□ -0.45
VAC14-203ENST00000561879 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
VAC14-203ENST00000561879 GLTPD2A6NH11 291 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 CDKL5O76039 1030 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms