RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 FLAD1Q8NFF5 587 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 RNF34Q969K3 372 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 SPON2Q9BUD6 331 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 GPR62Q9BZJ7 368 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 BCL11AQ9H165 835 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 ANTXR1Q9H6X2 564 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 CNNM2Q9H8M5 875 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 GMIPQ9P107 970 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 DDX41Q9UJV9 622 aaKnown RBP4.09□□□□□ -1.75
CHD9-204ENST00000561869 CTNND2Q9UQB3 1225 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 PCDHGB7Q9Y5F8 929 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 ARSHQ5FYA8 562 aa4.08□□□□□ -1.76
CHD9-204ENST00000561869 GK5Q6ZS86 529 aa4.08□□□□□ -1.76
CHD9-204ENST00000561869 USP48Q86UV5 1035 aa4.08□□□□□ -1.76
CHD9-204ENST00000561869 FAM168AQ92567 244 aa4.08□□□□□ -1.76
CHD9-204ENST00000561869 NKD1Q969G9 470 aa4.08□□□□□ -1.76
CHD9-204ENST00000561869 ATG4CQ96DT6 458 aa4.08□□□□□ -1.76
CHD9-204ENST00000561869 ASPNQ9BXN1 380 aa4.08□□□□□ -1.76
CHD9-204ENST00000561869 SHISA3A0PJX4 238 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 MEIS3P2A8K0S8 358 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 BIN1O00499 593 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 SCAMP3O14828 347 aaKnown RBP4.07□□□□□ -1.76
CHD9-204ENST00000561869 TPP2P29144 1249 aaPredicted RBP4.07□□□□□ -1.76
CHD9-204ENST00000561869 POLR2BP30876 1174 aaKnown RBP4.07□□□□□ -1.76
CHD9-204ENST00000561869 TNNI2P48788 182 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 ZNF165P49910 485 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 FYB2Q5VWT5 728 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 SPOCD1Q6ZMY3 1216 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 TMPRSS7Q7RTY8 843 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 TSPYL5Q86VY4 417 aaPredicted RBP4.07□□□□□ -1.76
CHD9-204ENST00000561869 PHACTR4Q8IZ21 702 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 TMEM40Q8WWA1 233 aa4.07□□□□□ -1.76
CHD9-204ENST00000561869 MRRFQ96E11 262 aaKnown RBP4.07□□□□□ -1.76
CHD9-204ENST00000561869 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.07□□□□□ -1.76
CHD9-204ENST00000561869 DNAJC25-GNG10A0A024R161 153 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 TNFRSF10CO14798 259 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 NME1P15531 152 aaKnown RBP4.06□□□□□ -1.76
CHD9-204ENST00000561869 RAG1P15918 1043 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 GBP1P32455 592 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 MCM4P33991 863 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 GDNFP39905 211 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 HDLBPQ00341 1268 aaKnown RBP4.06□□□□□ -1.76
CHD9-204ENST00000561869 MESP2Q0VG99 397 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 MLECQ14165 292 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 NBPF12Q5TAG4 269 aaPredicted RBP4.06□□□□□ -1.76
CHD9-204ENST00000561869 NLRC3Q7RTR2 1065 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 TMEM192Q8IY95 271 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 ALPK1Q96QP1 1244 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 TRIT1Q9H3H1 467 aaKnown RBP4.06□□□□□ -1.76
CHD9-204ENST00000561869 KCNH3Q9ULD8 1083 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 ZNRF3Q9ULT6 936 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 ZNF281Q9Y2X9 895 aa4.06□□□□□ -1.76
CHD9-204ENST00000561869 DBX1A6NMT0 343 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.05□□□□□ -1.76
CHD9-204ENST00000561869 FARP2O94887 1054 aaPredicted RBP4.05□□□□□ -1.76
CHD9-204ENST00000561869 ACRP10323 421 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 LRRFIP1Q32MZ4 808 aaKnown RBP4.05□□□□□ -1.76
CHD9-204ENST00000561869 NBPF9Q3BBW0 867 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 RALGPS1Q5JS13 557 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 CREG2Q8IUH2 290 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 CILP2Q8IUL8 1156 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 SLC9A7Q96T83 725 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.05□□□□□ -1.76
CHD9-204ENST00000561869 SP110Q9HB58 689 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 GPATCH2Q9NW75 528 aa4.05□□□□□ -1.76
CHD9-204ENST00000561869 ZNF503-AS2A6NEH8 195 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 CCNFP41002 786 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 PAK2Q13177 524 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 SNW1Q13573 536 aaKnown RBP4.04□□□□□ -1.76
CHD9-204ENST00000561869 C9orf131Q5VYM1 1079 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 INTS3Q68E01 1043 aaKnown RBP4.04□□□□□ -1.76
CHD9-204ENST00000561869 ZNF654Q8IZM8 581 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 RBBP8NLQ8NC74 664 aaPredicted RBP4.04□□□□□ -1.76
CHD9-204ENST00000561869 ADAMTS10Q9H324 1103 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 SLAMF8Q9P0V8 285 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 EBF1Q9UH73 591 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 DUSP13Q9UII6 198 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 PCDHA11Q9Y5I1 949 aa4.04□□□□□ -1.76
CHD9-204ENST00000561869 AFMP43652 599 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 ERVFC1P60507 584 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 RNF4P78317 190 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 TEKQ02763 1124 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 EGR3Q06889 387 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 RAD51AP2Q09MP3 1159 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 NMIQ13287 307 aaPredicted RBP4.03□□□□□ -1.76
CHD9-204ENST00000561869 FBLN7Q53RD9 439 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 TMC3Q7Z5M5 1100 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 TTC6Q86TZ1 520 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 ZSWIM9Q86XI8 627 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 NT5DC4Q86YG4 428 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 TAB3Q8N5C8 712 aaPredicted RBP4.03□□□□□ -1.76
CHD9-204ENST00000561869 USHBP1Q8N6Y0 703 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 ENOX1Q8TC92 643 aaKnown RBP4.03□□□□□ -1.76
CHD9-204ENST00000561869 RASGRP4Q8TDF6 673 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 SYTL5Q8TDW5 730 aaPredicted RBP4.03□□□□□ -1.76
CHD9-204ENST00000561869 ZNF512BQ96KM6 892 aaPredicted RBP4.03□□□□□ -1.76
CHD9-204ENST00000561869 HDAC8Q9BY41 377 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 GINM1Q9NU53 330 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms