RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.2□□□□□ -1.1
CDH1-203ENST00000561751 HMG20BQ9P0W2 317 aa8.2□□□□□ -1.1
CDH1-203ENST00000561751 TTF2Q9UNY4 1162 aaKnown RBP8.2□□□□□ -1.1
CDH1-203ENST00000561751 NHSL1Q5SYE7 1610 aa8.2□□□□□ -1.1
CDH1-203ENST00000561751 ZC3H4Q9UPT8 1303 aaKnown RBP8.2□□□□□ -1.1
CDH1-203ENST00000561751 QRICH2Q9H0J4 1663 aa8.2□□□□□ -1.1
CDH1-203ENST00000561751 PTPRUQ92729 1446 aa8.2□□□□□ -1.1
CDH1-203ENST00000561751 GOLGA6CA6NDK9 693 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 MGRN1O60291 552 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 N4BP1O75113 896 aaKnown RBP8.19□□□□□ -1.1
CDH1-203ENST00000561751 GOLGA6DP0CG33 693 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 GCKP35557 465 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 GCLCP48506 637 aaPredicted RBP8.19□□□□□ -1.1
CDH1-203ENST00000561751 CCNHP51946 323 aaPredicted RBP8.19□□□□□ -1.1
CDH1-203ENST00000561751 USP14P54578 494 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 UBASH3AP57075 661 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 NNTQ13423 1086 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 XRCC4Q13426 336 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 KRT32Q14532 448 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 CTC1Q2NKJ3 1217 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 HSP90AB4PQ58FF6 505 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 CC2D2BQ6DHV5 1058 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 PTCRAQ6ISU1 281 aaPredicted RBP8.19□□□□□ -1.1
CDH1-203ENST00000561751 C6orf89Q6UWU4 347 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 ZNF662Q6ZS27 426 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 FMR1NBQ8N0W7 255 aaPredicted RBP8.19□□□□□ -1.1
CDH1-203ENST00000561751 TEX9Q8N6V9 391 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 CCDC12Q8WUD4 166 aaPredicted RBP8.19□□□□□ -1.1
CDH1-203ENST00000561751 WDR24Q96S15 920 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 PNKPQ96T60 521 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 CRACR2AQ9BSW2 395 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 MMTAG2Q9BU76 263 aaKnown RBP8.19□□□□□ -1.1
CDH1-203ENST00000561751 SLC12A5Q9H2X9 1139 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 MBIPQ9NS73 344 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 GOLGA6AQ9NYA3 693 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 DDX20Q9UHI6 824 aaKnown RBP8.19□□□□□ -1.1
CDH1-203ENST00000561751 RPS6KL1Q9Y6S9 549 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 IFT172Q9UG01 1749 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 CRYBG1Q9Y4K1 1723 aa8.19□□□□□ -1.1
CDH1-203ENST00000561751 GOLGA6L10A6NI86 522 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 NUTM2BA6NNL0 878 aaPredicted RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 LRRIQ3A6PVS8 624 aaPredicted RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 NUTM2EB1AL46 878 aaPredicted RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 LUC7L3O95232 432 aaKnown RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 VSNL1P62760 191 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 ROR2Q01974 943 aaKnown RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 CKAP4Q07065 602 aaKnown RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 CCDC57Q2TAC2 916 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 TBC1D25Q3MII6 688 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 PPP4R3AQ6IN85 833 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 IQCEQ6IPM2 695 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 CDC37L1Q7L3B6 337 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 NUTM2AQ8IVF1 878 aaPredicted RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 TRIM58Q8NG06 486 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 SMARCC2Q8TAQ2 1214 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 MIPOL1Q8TD10 442 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 MRPS27Q92552 414 aaKnown RBP8.18□□□□□ -1.1
CDH1-203ENST00000561751 RILPL2Q969X0 211 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 CLIC6Q96NY7 704 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 EPN3Q9H201 632 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 KAT14Q9H8E8 782 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 RTEL1Q9NZ71 1219 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 TUBE1Q9UJT0 475 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 GRIN2DO15399 1336 aa8.18□□□□□ -1.1
CDH1-203ENST00000561751 FAM237AA0A1B0GTK4 181 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 NDUFAB1O14561 156 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 ZMYND10O75800 440 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 DNAJC8O75937 253 aaPredicted RBP8.17□□□□□ -1.1
CDH1-203ENST00000561751 YEATS4O95619 227 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 ATF3P18847 181 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 TNFRSF8P28908 595 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 GBP2P32456 591 aaPredicted RBP8.17□□□□□ -1.1
CDH1-203ENST00000561751 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
CDH1-203ENST00000561751 RAB27AP51159 221 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 CCNG1P51959 295 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 MYL5Q02045 173 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 ST3GAL1Q11201 340 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 TMED1Q13445 227 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 CMPK2Q5EBM0 449 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 RC3H1Q5TC82 1133 aaKnown RBP8.17□□□□□ -1.1
CDH1-203ENST00000561751 TTC19Q6DKK2 380 aaPredicted RBP8.17□□□□□ -1.1
CDH1-203ENST00000561751 CCDC70Q6NSX1 233 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 BARGINQ6ZT62 677 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 NOL8Q76FK4 1167 aaKnown RBP8.17□□□□□ -1.1
CDH1-203ENST00000561751 RASGRP2Q7LDG7 609 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 WAPLQ7Z5K2 1190 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 RETREG3Q86VR2 466 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 CD302Q8IX05 232 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 FUKQ8N0W3 1084 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 CFAP61Q8NHU2 1237 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 SPIRE2Q8WWL2 714 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDH1-203ENST00000561751 MAP4K1Q92918 833 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 BICD1Q96G01 975 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 ALS2CR12Q96Q35 445 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 NAPGQ99747 312 aaPredicted RBP8.17□□□□□ -1.1
CDH1-203ENST00000561751 SDF4Q9BRK5 362 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 SLC40A1Q9NP59 571 aa8.17□□□□□ -1.1
CDH1-203ENST00000561751 RGL1Q9NZL6 768 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms