RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 SLC9C2Q5TAH2 1124 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 MFSD14CQ5VZR4 134 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 OLFML2BQ68BL8 750 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 CCAR1Q8IX12 1150 aaKnown RBP10.18□□□□□ -0.78
PALB2-202ENST00000561514 SIRT2Q8IXJ6 389 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 RPAP2Q8IXW5 612 aaPredicted RBP10.18□□□□□ -0.78
PALB2-202ENST00000561514 ABRAQ8N0Z2 381 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 MB21D1Q8N884 522 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 LPAR1Q92633 364 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 KIF1BPQ96EK5 621 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 RPAP3Q9H6T3 665 aaPredicted RBP10.18□□□□□ -0.78
PALB2-202ENST00000561514 DDX20Q9UHI6 824 aaKnown RBP10.18□□□□□ -0.78
PALB2-202ENST00000561514 ROBO3Q96MS0 1386 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 ZNF532Q9HCE3 1301 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 A0A0G2JMZ2 1700 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 DNM1LO00429 736 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 STRNO43815 780 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 COG2Q14746 738 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 GLIPR1L2Q4G1C9 344 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 KIAA1755Q5JYT7 1200 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 TMEM179Q6ZVK1 233 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 SIAH1Q8IUQ4 282 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 LCORLQ8N3X6 602 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 TRPV1Q8NER1 839 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 NPLOC4Q8TAT6 608 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 PANK1Q8TE04 598 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 MOV10L1Q9BXT6 1211 aaKnown RBP10.17□□□□□ -0.78
PALB2-202ENST00000561514 SPATC1LQ9H0A9 340 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 ZBTB40Q9NUA8 1239 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 SWAP70Q9UH65 585 aa10.17□□□□□ -0.78
PALB2-202ENST00000561514 RAB11FIP3O75154 756 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 POLR3DP05423 398 aaPredicted RBP10.16□□□□□ -0.78
PALB2-202ENST00000561514 SYN1P17600 705 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 ADD2P35612 726 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 SNX17Q15036 470 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 FAM109BQ6ICB4 259 aaPredicted RBP10.16□□□□□ -0.78
PALB2-202ENST00000561514 CLASRPQ8N2M8 674 aaKnown RBP10.16□□□□□ -0.78
PALB2-202ENST00000561514 IL1RAPL2Q9NP60 686 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 ATP8A2Q9NTI2 1148 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 MTMR10Q9NXD2 777 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 MCM9Q9NXL9 1143 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 HOXC10Q9NYD6 342 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 ADAMTS5Q9UNA0 930 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 TMX2Q9Y320 296 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
PALB2-202ENST00000561514 MYO5AQ9Y4I1 1855 aaKnown RBP10.15□□□□□ -0.78
PALB2-202ENST00000561514 GOLIM4O00461 696 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 HMMRO75330 724 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 CYP2D6P10635 497 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 MS4A1P11836 297 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 ATP5JP18859 108 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 ADORA2AP29274 412 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 CYP2C19P33261 490 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 ATP2B2Q01814 1243 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 C1orf53Q5VUE5 145 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 SLC44A5Q8NCS7 719 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 SDR42E1Q8WUS8 393 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 CCDC17Q96LX7 622 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 UBE2OQ9C0C9 1292 aaKnown RBP10.15□□□□□ -0.78
PALB2-202ENST00000561514 MROH8Q9H579 483 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 VCPKMTQ9H867 229 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 STXBP5LQ9Y2K9 1186 aa10.15□□□□□ -0.78
PALB2-202ENST00000561514 TTC28Q96AY4 2481 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 WDR46O15213 610 aaKnown RBP10.14□□□□□ -0.79
PALB2-202ENST00000561514 SEPT4O43236 478 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 COBLO75128 1261 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 NEFLP07196 543 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 AKR1B1P15121 316 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 ERCC3P19447 782 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 ICA1Q05084 483 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 UBE3CQ15386 1083 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 C12orf60Q5U649 245 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 C16orf86Q6ZW13 317 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 DEFB123Q8N688 67 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 HAUS7Q99871 368 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 SH2D4AQ9H788 454 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 CWC22Q9HCG8 908 aaKnown RBP10.14□□□□□ -0.79
PALB2-202ENST00000561514 PAG1Q9NWQ8 432 aa10.14□□□□□ -0.79
PALB2-202ENST00000561514 MYH1P12882 1939 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 RLFQ13129 1914 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 PRKAB2O43741 272 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 MBD4O95243 580 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 IFIT2P09913 472 aaKnown RBP10.13□□□□□ -0.79
PALB2-202ENST00000561514 REPS2Q8NFH8 660 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 ATG4CQ96DT6 458 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 DYNLL2Q96FJ2 89 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
PALB2-202ENST00000561514 TANGO6Q9C0B7 1094 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 ARMT1Q9H993 441 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 NAV1Q8NEY1 1877 aa10.13□□□□□ -0.79
PALB2-202ENST00000561514 SMIM22K7EJ46 135 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 MPHOSPH10O00566 681 aaKnown RBP10.12□□□□□ -0.79
PALB2-202ENST00000561514 FLOT1O75955 427 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 SLC25A27O95847 323 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 CDK8P49336 464 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 RTP1P59025 263 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms