RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 GBP1P32455 592 aa8.56□□□□□ -1.04
HMBOX1-216ENST00000561377 RAP1GAPP47736 663 aa8.56□□□□□ -1.04
HMBOX1-216ENST00000561377 ZNF326Q5BKZ1 582 aaKnown RBP8.56□□□□□ -1.04
HMBOX1-216ENST00000561377 SYDE1Q6ZW31 735 aaPredicted RBP8.56□□□□□ -1.04
HMBOX1-216ENST00000561377 FBXO27Q8NI29 283 aa8.56□□□□□ -1.04
HMBOX1-216ENST00000561377 NSUN3Q9H649 340 aaKnown RBP8.56□□□□□ -1.04
HMBOX1-216ENST00000561377 ERVFC1P60507 584 aa8.55□□□□□ -1.04
HMBOX1-216ENST00000561377 PDZD8Q8NEN9 1154 aa8.55□□□□□ -1.04
HMBOX1-216ENST00000561377 DHX38Q92620 1227 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-216ENST00000561377 DIRC2Q96SL1 478 aa8.55□□□□□ -1.04
HMBOX1-216ENST00000561377 BCL2L13Q9BXK5 485 aa8.55□□□□□ -1.04
HMBOX1-216ENST00000561377 KCNQ5Q9NR82 932 aa8.55□□□□□ -1.04
HMBOX1-216ENST00000561377 SUPT16HQ9Y5B9 1047 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-216ENST00000561377 TLR3O15455 904 aaKnown RBP8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 EIF4A3P38919 411 aaKnown RBP8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 CLEC16AQ2KHT3 1053 aa8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 FBXL19Q6PCT2 694 aa8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 OXR1Q8N573 874 aa8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 KIF2CQ99661 725 aa8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 LRRC3Q9BY71 257 aa8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 ASCC2Q9H1I8 757 aaPredicted RBP8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 EPB41L4BQ9H329 900 aa8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 COPRSQ9NQ92 184 aa8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 PCDHA11Q9Y5I1 949 aa8.54□□□□□ -1.04
HMBOX1-216ENST00000561377 RBM47A0AV96 593 aaKnown RBP8.53□□□□□ -1.04
HMBOX1-216ENST00000561377 RGS13O14921 159 aa8.53□□□□□ -1.04
HMBOX1-216ENST00000561377 DNAJA2O60884 412 aa8.53□□□□□ -1.04
HMBOX1-216ENST00000561377 LILRA2Q8N149 483 aa8.53□□□□□ -1.04
HMBOX1-216ENST00000561377 TOX2Q96NM4 488 aa8.53□□□□□ -1.04
HMBOX1-216ENST00000561377 DCP1AQ9NPI6 582 aaPredicted RBP8.53□□□□□ -1.04
HMBOX1-216ENST00000561377 NFIBO00712 420 aa8.52□□□□□ -1.05
HMBOX1-216ENST00000561377 ZGLP1P0C6A0 271 aa8.52□□□□□ -1.05
HMBOX1-216ENST00000561377 RNF4P78317 190 aa8.52□□□□□ -1.05
HMBOX1-216ENST00000561377 KRTAP19-4Q3LI73 84 aa8.52□□□□□ -1.05
HMBOX1-216ENST00000561377 HS2ST1Q7LGA3 356 aa8.52□□□□□ -1.05
HMBOX1-216ENST00000561377 GIPC2Q8TF65 315 aa8.52□□□□□ -1.05
HMBOX1-216ENST00000561377 PCDHB14Q9Y5E9 798 aa8.52□□□□□ -1.05
HMBOX1-216ENST00000561377 FITM1A5D6W6 292 aa8.51□□□□□ -1.05
HMBOX1-216ENST00000561377 SLC22A31A6NKX4 558 aa8.51□□□□□ -1.05
HMBOX1-216ENST00000561377 GREM1O60565 184 aa8.51□□□□□ -1.05
HMBOX1-216ENST00000561377 RAG1P15918 1043 aa8.51□□□□□ -1.05
HMBOX1-216ENST00000561377 ANKLE2Q86XL3 938 aa8.51□□□□□ -1.05
HMBOX1-216ENST00000561377 BRMS1Q9HCU9 246 aa8.51□□□□□ -1.05
HMBOX1-216ENST00000561377 GMIPQ9P107 970 aa8.51□□□□□ -1.05
HMBOX1-216ENST00000561377 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
HMBOX1-216ENST00000561377 ATE1O95260 518 aa8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 DUSP4Q13115 394 aa8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 NR0B2Q15466 257 aa8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 ARSHQ5FYA8 562 aa8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 SPPL2CQ8IUH8 684 aa8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 ENOX1Q8TC92 643 aaKnown RBP8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 ZNF296Q8WUU4 475 aaPredicted RBP8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 VWCEQ96DN2 955 aa8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMBOX1-216ENST00000561377 SHISA3A0PJX4 238 aa8.49□□□□□ -1.05
HMBOX1-216ENST00000561377 TMEM253P0C7T8 217 aa8.49□□□□□ -1.05
HMBOX1-216ENST00000561377 TRHRP34981 398 aaPredicted RBP8.49□□□□□ -1.05
HMBOX1-216ENST00000561377 CHRNEQ04844 493 aa8.49□□□□□ -1.05
HMBOX1-216ENST00000561377 MRPL58Q14197 206 aaKnown RBP8.49□□□□□ -1.05
HMBOX1-216ENST00000561377 ZSCAN18Q8TBC5 510 aaPredicted RBP8.49□□□□□ -1.05
HMBOX1-216ENST00000561377 RNF32Q9H0A6 362 aa8.49□□□□□ -1.05
HMBOX1-216ENST00000561377 SP110Q9HB58 689 aa8.49□□□□□ -1.05
HMBOX1-216ENST00000561377 UBOX5O94941 541 aa8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 C1QTNF9P0C862 333 aa8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 TEKQ02763 1124 aa8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 NMIQ13287 307 aaPredicted RBP8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 SPOCD1Q6ZMY3 1216 aa8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 CILP2Q8IUL8 1156 aa8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 ANKS4BQ8N8V4 417 aa8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 SYTL5Q8TDW5 730 aaPredicted RBP8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 SLC6A17Q9H1V8 727 aa8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 C19orf44Q9H6X5 657 aa8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 CWC22Q9HCG8 908 aaKnown RBP8.48□□□□□ -1.05
HMBOX1-216ENST00000561377 RAD51AP2Q09MP3 1159 aa8.47□□□□□ -1.05
HMBOX1-216ENST00000561377 FBLN7Q53RD9 439 aa8.47□□□□□ -1.05
HMBOX1-216ENST00000561377 OVOS1Q6IE37 1185 aa8.47□□□□□ -1.05
HMBOX1-216ENST00000561377 SLC26A8Q96RN1 970 aa8.47□□□□□ -1.05
HMBOX1-216ENST00000561377 EHMT1Q9H9B1 1298 aa8.47□□□□□ -1.05
HMBOX1-216ENST00000561377 KRT1P04264 644 aa8.46□□□□□ -1.06
HMBOX1-216ENST00000561377 CDCP2Q5VXM1 449 aa8.46□□□□□ -1.06
HMBOX1-216ENST00000561377 IRF2BP1Q8IU81 584 aa8.46□□□□□ -1.06
HMBOX1-216ENST00000561377 REXO1Q8N1G1 1221 aaKnown RBP8.46□□□□□ -1.06
HMBOX1-216ENST00000561377 HDAC8Q9BY41 377 aa8.46□□□□□ -1.06
HMBOX1-216ENST00000561377 CFPP27918 469 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 CCNFP41002 786 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 CRKP46108 304 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 APOBRQ0VD83 1088 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 SNX17Q15036 470 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 SEZ6Q53EL9 994 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 NBPF12Q5TAG4 269 aaPredicted RBP8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 LRRC56Q8IYG6 542 aaPredicted RBP8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 DAGLBQ8NCG7 672 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 CNNM2Q9H8M5 875 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 ADAMTS1Q9UHI8 967 aa8.45□□□□□ -1.06
HMBOX1-216ENST00000561377 TCAF2A6NFQ2 919 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 MED14OSP0DP75 135 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 GLDCP23378 1020 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 MCM4P33991 863 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 ZNF165P49910 485 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms