RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 NAV1Q8NEY1 1877 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 MPHOSPH10O00566 681 aaKnown RBP14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 TMEM179Q6ZVK1 233 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 CLASRPQ8N2M8 674 aaKnown RBP14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 MB21D1Q8N884 522 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 ARRDC4Q8NCT1 418 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 TRPV1Q8NER1 839 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 KIF1BPQ96EK5 621 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 LBHD1Q9BQE6 289 aaPredicted RBP14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 SPATC1LQ9H0A9 340 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 SWAP70Q9UH65 585 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 ZNF532Q9HCE3 1301 aa14.32□□□□□ -0.12
CARMIL3-204ENST00000561354 ZNF236Q9UL36 1845 aa14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 ADORA2AP29274 412 aa14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 EVX2Q03828 476 aa14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 FAM109BQ6ICB4 259 aaPredicted RBP14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 LCORLQ8N3X6 602 aa14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 SDR42E1Q8WUS8 393 aa14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 MROH8Q9H579 483 aa14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 RLFQ13129 1914 aa14.31□□□□□ -0.12
CARMIL3-204ENST00000561354 A0A0G2JMZ2 1700 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 POTEB2H3BUK9 544 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 GOLIM4O00461 696 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 ERCC3P19447 782 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 DSG3P32926 999 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 KIAA1755Q5JYT7 1200 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 SIAH1Q8IUQ4 282 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 RPAP2Q8IXW5 612 aaPredicted RBP14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 ABRAQ8N0Z2 381 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 PANK1Q8TE04 598 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 SLC5A4Q9NY91 659 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 TMX2Q9Y320 296 aa14.3□□□□□ -0.12
CARMIL3-204ENST00000561354 SEPT4O43236 478 aa14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 COBLO75128 1261 aa14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 IFIT2P09913 472 aaKnown RBP14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 CYP2D6P10635 497 aa14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 MS4A1P11836 297 aa14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 ATN1P54259 1190 aaPredicted RBP14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 CCDC17Q96LX7 622 aa14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 DNAJC2Q99543 621 aaKnown RBP14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 ARHGEF10LQ9HCE6 1279 aa14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 PRKAG2Q9UGJ0 569 aa14.29□□□□□ -0.12
CARMIL3-204ENST00000561354 RAB11FIP3O75154 756 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 HMMRO75330 724 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 FLOT1O75955 427 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 ADD2P35612 726 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 RTP1P59025 263 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 ICA1Q05084 483 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 GJC2Q5T442 439 aaPredicted RBP14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 SLC39A5Q6ZMH5 540 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 DYNLL2Q96FJ2 89 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 VCPKMTQ9H867 229 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 ARMT1Q9H993 441 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 PAG1Q9NWQ8 432 aa14.28□□□□□ -0.12
CARMIL3-204ENST00000561354 KBTBD13C9JR72 458 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 WDR46O15213 610 aaKnown RBP14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 AKR1B1P15121 316 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 ATP5JP18859 108 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 PLS1Q14651 629 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 SNX17Q15036 470 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 C12orf60Q5U649 245 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 NCAPG2Q86XI2 1143 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 ATG4CQ96DT6 458 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 MAML3Q96JK9 1138 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 NRBP1Q9UHY1 535 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 ADAMTS5Q9UNA0 930 aa14.27□□□□□ -0.13
CARMIL3-204ENST00000561354 COL6A3P12111 3177 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 APBB1O00213 710 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 PRKAB2O43741 272 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 MBD4O95243 580 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 SLC25A27O95847 323 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 FCER1AP12319 257 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 CDK8P49336 464 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 CLEC10AQ8IUN9 316 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 SIRT2Q8IXJ6 389 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 AMOTL1Q8IY63 956 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 ZBTB40Q9NUA8 1239 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 DDX19BQ9UMR2 479 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 ATP11BQ9Y2G3 1177 aa14.26□□□□□ -0.13
CARMIL3-204ENST00000561354 USP17L12C9JPN9 530 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 USP17L21D6R901 530 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 TMEM132BQ14DG7 1078 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 LRRC41Q15345 812 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 UBE3CQ15386 1083 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 PRAMEF19Q5SWL8 479 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 ANO1Q5XXA6 986 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 C16orf86Q6ZW13 317 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 DDRGK1Q96HY6 314 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 GUCD1Q96NT3 240 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 HAUS7Q99871 368 aa14.25□□□□□ -0.13
CARMIL3-204ENST00000561354 BOLA2Q9H3K6 86 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms