RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 NBPF3Q9H094 633 aa16.09■□□□□ 0.17
SHF-210ENST00000561239 MORF4L1Q9UBU8 362 aa16.09■□□□□ 0.17
SHF-210ENST00000561239 ECM2O94769 699 aaPredicted RBP16.08■□□□□ 0.16
SHF-210ENST00000561239 VCAM1P19320 739 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 CTGFP29279 349 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 SOX10P56693 466 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 MLLT1Q03111 559 aaPredicted RBP16.08■□□□□ 0.16
SHF-210ENST00000561239 PDE4BQ07343 736 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 SIAH1Q8IUQ4 282 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
SHF-210ENST00000561239 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 TMEM106CQ9BVX2 250 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 TMX2Q9Y320 296 aa16.08■□□□□ 0.16
SHF-210ENST00000561239 MYH8P13535 1937 aa16.07■□□□□ 0.16
SHF-210ENST00000561239 IGKV6D-41A0A0C4DH26 115 aa16.07■□□□□ 0.16
SHF-210ENST00000561239 SLAIN1Q8ND83 568 aa16.07■□□□□ 0.16
SHF-210ENST00000561239 ZNF333Q96JL9 665 aa16.07■□□□□ 0.16
SHF-210ENST00000561239 RPAP3Q9H6T3 665 aaPredicted RBP16.07■□□□□ 0.16
SHF-210ENST00000561239 GOPCQ9HD26 462 aa16.07■□□□□ 0.16
SHF-210ENST00000561239 HOXC10Q9NYD6 342 aa16.07■□□□□ 0.16
SHF-210ENST00000561239 PLIN4Q96Q06 1357 aa16.07■□□□□ 0.16
SHF-210ENST00000561239 LAMA4Q16363 1823 aa16.07■□□□□ 0.16
SHF-210ENST00000561239 A0A1W2PRG0 241 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 ORC4O43929 436 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 CDC45O75419 566 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 CCNA1P78396 465 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 PTH1RQ03431 593 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 PRKCZQ05513 592 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 CTDSPL2Q05D32 466 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 IRF5Q13568 498 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 PPP4R3BQ5MIZ7 849 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 VCPKMTQ9H867 229 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 RABGAP1Q9Y3P9 1069 aa16.06■□□□□ 0.16
SHF-210ENST00000561239 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
SHF-210ENST00000561239 EEF2P13639 858 aaKnown RBP16.05■□□□□ 0.16
SHF-210ENST00000561239 MAPK4P31152 587 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 GRK4P32298 578 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 FLT3LGP49771 235 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 ERVK-9P63128 1117 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 ERVK-24P63145 666 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 UBXN2AP68543 259 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 COG2Q14746 738 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 LBX2Q6XYB7 198 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 TBC1D10CQ8IV04 446 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 PXYLP1Q8TE99 480 aa16.05■□□□□ 0.16
SHF-210ENST00000561239 LSG1Q9H089 658 aaKnown RBP16.05■□□□□ 0.16
SHF-210ENST00000561239 WDR46O15213 610 aaKnown RBP16.04■□□□□ 0.16
SHF-210ENST00000561239 PRDM1O75626 825 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 NOVP48745 357 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 STK11IPQ8N1F8 1099 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 NEDD1Q8NHV4 660 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 SH3TC2Q8TF17 1288 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 STAG1Q8WVM7 1258 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 TANGO6Q9C0B7 1094 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
SHF-210ENST00000561239 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 NYAP2Q9P242 653 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 RBPJLQ9UBG7 517 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 BIN2Q9UBW5 565 aaPredicted RBP16.04■□□□□ 0.16
SHF-210ENST00000561239 CTNNA3Q9UI47 895 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 SYNPO2Q9UMS6 1093 aa16.04■□□□□ 0.16
SHF-210ENST00000561239 MGAMO43451 1857 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 ZNF213O14771 459 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 TSPY3P0CV98 308 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 TSPY8P0CW00 308 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 NT5C2P49902 561 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 HAND2P61296 217 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 AKNAD1Q5T1N1 836 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 MB21D1Q8N884 522 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 SOCS4Q8WXH5 440 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 GABRQQ9UN88 632 aa16.03■□□□□ 0.16
SHF-210ENST00000561239 ADCY3O60266 1144 aa16.02■□□□□ 0.16
SHF-210ENST00000561239 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
SHF-210ENST00000561239 NKX2-3Q8TAU0 364 aa16.02■□□□□ 0.16
SHF-210ENST00000561239 NUDT12Q9BQG2 462 aa16.02■□□□□ 0.16
SHF-210ENST00000561239 TXNRD2Q9NNW7 524 aa16.02■□□□□ 0.16
SHF-210ENST00000561239 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
SHF-210ENST00000561239 ZSWIM8A7E2V4 1837 aa16.02■□□□□ 0.16
SHF-210ENST00000561239 HTTP42858 3142 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 SPDYE16A6NNV3 312 aaPredicted RBP16.01■□□□□ 0.15
SHF-210ENST00000561239 FLOT1O75955 427 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 TTLL1O95922 423 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 CYP21A2P08686 494 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 CAPN2P17655 700 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 TFAP4Q01664 338 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 IMMTQ16891 758 aaKnown RBP16.01■□□□□ 0.15
SHF-210ENST00000561239 PLEKHH3Q7Z736 793 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 TRMT44Q8IYL2 757 aaKnown RBP16.01■□□□□ 0.15
SHF-210ENST00000561239 SPICE1Q8N0Z3 855 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 MTMR4Q9NYA4 1195 aa16.01■□□□□ 0.15
SHF-210ENST00000561239 NEDD4P46934 1319 aa16■□□□□ 0.15
SHF-210ENST00000561239 RAD21O60216 631 aa16■□□□□ 0.15
SHF-210ENST00000561239 NECTIN1Q15223 517 aa16■□□□□ 0.15
SHF-210ENST00000561239 Q3C1V9 767 aa16■□□□□ 0.15
SHF-210ENST00000561239 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
SHF-210ENST00000561239 MFSD6Q6ZSS7 791 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms