RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 RCAN3Q9UKA8 241 aa16.19■□□□□ 0.18
PSME1-208ENST00000561059 RAB11FIP3O75154 756 aa16.18■□□□□ 0.18
PSME1-208ENST00000561059 CNGA1P29973 690 aa16.18■□□□□ 0.18
PSME1-208ENST00000561059 CYP2C19P33261 490 aa16.18■□□□□ 0.18
PSME1-208ENST00000561059 TRMT44Q8IYL2 757 aaKnown RBP16.18■□□□□ 0.18
PSME1-208ENST00000561059 SLC15A5A6NIM6 579 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 GLRX3O76003 335 aaKnown RBP16.17■□□□□ 0.18
PSME1-208ENST00000561059 CAPN2P17655 700 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 ATP5JP18859 108 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 LRRC26Q2I0M4 334 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 TMED8Q6PL24 325 aaPredicted RBP16.17■□□□□ 0.18
PSME1-208ENST00000561059 SIAH1Q8IUQ4 282 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 STK11IPQ8N1F8 1099 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 GDF15Q99988 308 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 MOV10L1Q9BXT6 1211 aaKnown RBP16.17■□□□□ 0.18
PSME1-208ENST00000561059 IVNS1ABPQ9Y6Y0 642 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 COL6A3P12111 3177 aa16.17■□□□□ 0.18
PSME1-208ENST00000561059 MAGEA10P43363 369 aaPredicted RBP16.16■□□□□ 0.18
PSME1-208ENST00000561059 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 GRB14Q14449 540 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 PLS1Q14651 629 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 COG2Q14746 738 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 MFSD14CQ5VZR4 134 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 ANO1Q5XXA6 986 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 TSHZ3Q63HK5 1081 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 LBX2Q6XYB7 198 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 TMEM179Q6ZVK1 233 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 TRPV1Q8NER1 839 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 ATG4CQ96DT6 458 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 HAUS7Q99871 368 aa16.16■□□□□ 0.18
PSME1-208ENST00000561059 LAMA2P24043 3122 aaKnown RBP16.16■□□□□ 0.18
PSME1-208ENST00000561059 USP17L12C9JPN9 530 aa16.15■□□□□ 0.18
PSME1-208ENST00000561059 USP17L21D6R901 530 aa16.15■□□□□ 0.18
PSME1-208ENST00000561059 COL6A1P12109 1028 aa16.15■□□□□ 0.18
PSME1-208ENST00000561059 CDK8P49336 464 aa16.15■□□□□ 0.18
PSME1-208ENST00000561059 ICA1Q05084 483 aa16.15■□□□□ 0.18
PSME1-208ENST00000561059 PUS7LQ9H0K6 701 aaKnown RBP16.15■□□□□ 0.18
PSME1-208ENST00000561059 SLC4A4Q9Y6R1 1079 aa16.15■□□□□ 0.18
PSME1-208ENST00000561059 A0A0C4DFX4 3053 aa16.15■□□□□ 0.18
PSME1-208ENST00000561059 RAD21O60216 631 aa16.14■□□□□ 0.17
PSME1-208ENST00000561059 FLOT1O75955 427 aa16.14■□□□□ 0.17
PSME1-208ENST00000561059 ERCC3P19447 782 aa16.14■□□□□ 0.17
PSME1-208ENST00000561059 ADORA2AP29274 412 aa16.14■□□□□ 0.17
PSME1-208ENST00000561059 ATN1P54259 1190 aaPredicted RBP16.14■□□□□ 0.17
PSME1-208ENST00000561059 DPP9Q86TI2 863 aa16.14■□□□□ 0.17
PSME1-208ENST00000561059 LRRCC1Q9C099 1032 aa16.14■□□□□ 0.17
PSME1-208ENST00000561059 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.171e-7■■■■■ 50.2
PSME1-208ENST00000561059 SPATC1LQ9H0A9 340 aa16.14■□□□□ 0.17
PSME1-208ENST00000561059 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
PSME1-208ENST00000561059 COBLO75128 1261 aa16.13■□□□□ 0.17
PSME1-208ENST00000561059 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
PSME1-208ENST00000561059 DSG3P32926 999 aa16.13■□□□□ 0.17
PSME1-208ENST00000561059 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
PSME1-208ENST00000561059 C12orf60Q5U649 245 aa16.13■□□□□ 0.17
PSME1-208ENST00000561059 NCAPG2Q86XI2 1143 aa16.13■□□□□ 0.17
PSME1-208ENST00000561059 SENP6Q9GZR1 1112 aaPredicted RBP16.13■□□□□ 0.17
PSME1-208ENST00000561059 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
PSME1-208ENST00000561059 ATP8A2Q9NTI2 1148 aa16.13■□□□□ 0.17
PSME1-208ENST00000561059 FBXO28Q9NVF7 368 aa16.13■□□□□ 0.17
PSME1-208ENST00000561059 HOXC10Q9NYD6 342 aa16.13■□□□□ 0.17
PSME1-208ENST00000561059 DDX20Q9UHI6 824 aaKnown RBP16.13■□□□□ 0.17
PSME1-208ENST00000561059 A0A1W2PPC1 479 aa16.12■□□□□ 0.17
PSME1-208ENST00000561059 HOXC6P09630 235 aa16.12■□□□□ 0.17
PSME1-208ENST00000561059 EEF2P13639 858 aaKnown RBP16.12■□□□□ 0.17
PSME1-208ENST00000561059 PRAMEF19Q5SWL8 479 aa16.12■□□□□ 0.17
PSME1-208ENST00000561059 CTR9Q6PD62 1173 aa16.12■□□□□ 0.17
PSME1-208ENST00000561059 UBE2OQ9C0C9 1292 aaKnown RBP16.12■□□□□ 0.17
PSME1-208ENST00000561059 VCPKMTQ9H867 229 aa16.12■□□□□ 0.17
PSME1-208ENST00000561059 TMX2Q9Y320 296 aa16.12■□□□□ 0.17
PSME1-208ENST00000561059 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
PSME1-208ENST00000561059 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
PSME1-208ENST00000561059 GJC2Q5T442 439 aaPredicted RBP16.11■□□□□ 0.17
PSME1-208ENST00000561059 C16orf86Q6ZW13 317 aa16.11■□□□□ 0.17
PSME1-208ENST00000561059 Q7L0L9 218 aa16.11■□□□□ 0.17
PSME1-208ENST00000561059 CYBAP13498 195 aa16.1■□□□□ 0.17
PSME1-208ENST00000561059 BMP8BP34820 402 aa16.1■□□□□ 0.17
PSME1-208ENST00000561059 TMEM132BQ14DG7 1078 aa16.1■□□□□ 0.17
PSME1-208ENST00000561059 AMOTL1Q8IY63 956 aa16.1■□□□□ 0.17
PSME1-208ENST00000561059 DDRGK1Q96HY6 314 aa16.1■□□□□ 0.17
PSME1-208ENST00000561059 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
PSME1-208ENST00000561059 MINDY4BA8MYZ0 360 aa16.09■□□□□ 0.17
PSME1-208ENST00000561059 FAM83BQ5T0W9 1011 aa16.09■□□□□ 0.17
PSME1-208ENST00000561059 LPAR1Q92633 364 aa16.09■□□□□ 0.17
PSME1-208ENST00000561059 OSBP2Q969R2 916 aa16.09■□□□□ 0.17
PSME1-208ENST00000561059 STRBPQ96SI9 672 aaKnown RBP16.09■□□□□ 0.17
PSME1-208ENST00000561059 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.09■□□□□ 0.17
PSME1-208ENST00000561059 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
PSME1-208ENST00000561059 SH2D4AQ9H788 454 aa16.09■□□□□ 0.17
PSME1-208ENST00000561059 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
PSME1-208ENST00000561059 RLFQ13129 1914 aa16.09■□□□□ 0.17
PSME1-208ENST00000561059 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.16
PSME1-208ENST00000561059 IGHA2P01877 340 aa16.08■□□□□ 0.16
PSME1-208ENST00000561059 PGK2P07205 417 aa16.08■□□□□ 0.16
PSME1-208ENST00000561059 OLFML2BQ68BL8 750 aa16.08■□□□□ 0.16
PSME1-208ENST00000561059 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
PSME1-208ENST00000561059 TDHQ8IZJ6 230 aa16.08■□□□□ 0.16
PSME1-208ENST00000561059 MB21D1Q8N884 522 aa16.08■□□□□ 0.16
PSME1-208ENST00000561059 SHCBP1Q8NEM2 672 aa16.08■□□□□ 0.16
PSME1-208ENST00000561059 CCDC17Q96LX7 622 aa16.08■□□□□ 0.16
PSME1-208ENST00000561059 A0A0G2JMZ2 1700 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms