RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 PLCD1P51178 756 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 GRIK5Q16478 980 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 PIK3AP1Q6ZUJ8 805 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 SH3RF1Q7Z6J0 888 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 FERMT2Q96AC1 680 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
CRTC3-210ENST00000560927 NLRP5P59047 1200 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 TBX2Q13207 712 aaPredicted RBP16.65■□□□□ 0.26
CRTC3-210ENST00000560927 STAMQ92783 540 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
CRTC3-210ENST00000560927 NPHP1O15259 732 aa16.64■□□□□ 0.26
CRTC3-210ENST00000560927 ATP2C1P98194 919 aaPredicted RBP16.64■□□□□ 0.26
CRTC3-210ENST00000560927 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.26
CRTC3-210ENST00000560927 SMYD4Q8IYR2 804 aaPredicted RBP16.64■□□□□ 0.26
CRTC3-210ENST00000560927 GPR101Q96P66 508 aaPredicted RBP16.64■□□□□ 0.26
CRTC3-210ENST00000560927 NOL10Q9BSC4 688 aaKnown RBP16.64■□□□□ 0.26
CRTC3-210ENST00000560927 ANKIB1Q9P2G1 1089 aa16.64■□□□□ 0.26
CRTC3-210ENST00000560927 MKRN1Q9UHC7 482 aaKnown RBP16.64■□□□□ 0.26
CRTC3-210ENST00000560927 BTAF1O14981 1849 aa16.64■□□□□ 0.25
CRTC3-210ENST00000560927 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
CRTC3-210ENST00000560927 CBX1P83916 185 aa16.64■□□□□ 0.25
CRTC3-210ENST00000560927 TFAP4Q01664 338 aa16.64■□□□□ 0.25
CRTC3-210ENST00000560927 NFIXQ14938 502 aa16.64■□□□□ 0.25
CRTC3-210ENST00000560927 DIXDC1Q155Q3 683 aa16.64■□□□□ 0.25
CRTC3-210ENST00000560927 KLHL10Q6JEL2 608 aa16.64■□□□□ 0.25
CRTC3-210ENST00000560927 SH3RF3Q8TEJ3 882 aaPredicted RBP16.64■□□□□ 0.25
CRTC3-210ENST00000560927 BMP15O95972 392 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 DPYDQ12882 1025 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 IL17AQ16552 155 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 MAST2Q6P0Q8 1798 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 ERCC5P28715 1186 aaPredicted RBP16.63■□□□□ 0.25
CRTC3-210ENST00000560927 MCM7P33993 719 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 ADKP55263 362 aaKnown RBP16.63■□□□□ 0.25
CRTC3-210ENST00000560927 STX17P56962 302 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 C12orf60Q5U649 245 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 HOMER1Q86YM7 354 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
CRTC3-210ENST00000560927 FANCGO15287 622 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 CUL4BQ13620 913 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 SPECC1LQ69YQ0 1117 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 LRRN4CLQ8ND94 238 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
CRTC3-210ENST00000560927 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 CCDC88AQ3V6T2 1871 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 SLU7O95391 586 aaKnown RBP16.62■□□□□ 0.25
CRTC3-210ENST00000560927 LDHBP07195 334 aaKnown RBP16.62■□□□□ 0.25
CRTC3-210ENST00000560927 USP5P45974 858 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 SPTY2D1Q68D10 685 aaPredicted RBP16.62■□□□□ 0.25
CRTC3-210ENST00000560927 APTXQ7Z2E3 356 aaKnown RBP16.62■□□□□ 0.25
CRTC3-210ENST00000560927 REXO1L1PQ8IX06 675 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 L2HGDHQ9H9P8 463 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 XDHP47989 1333 aa16.62■□□□□ 0.25
CRTC3-210ENST00000560927 USP17L3A6NCW0 530 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 USP17L4A6NCW7 530 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 NR1I3Q14994 352 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 E2F4Q16254 413 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 TRIM65Q6PJ69 517 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 USP17L1Q7RTZ2 530 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 SLC44A5Q8NCS7 719 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 PNMA1Q8ND90 353 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 BLZF1Q9H2G9 400 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 ETF1P62495 437 aaKnown RBP16.61■□□□□ 0.25
CRTC3-210ENST00000560927 ELF2Q15723 593 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 CCDC93Q567U6 631 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 RASGRP4Q8TDF6 673 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 MTRQ99707 1265 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 BAG1Q99933 345 aaPredicted RBP16.61■□□□□ 0.25
CRTC3-210ENST00000560927 DNAI1Q9UI46 699 aa16.61■□□□□ 0.25
CRTC3-210ENST00000560927 PPP1R3GB7ZBB8 358 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 TEX33O43247 280 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 COBLO75128 1261 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 KIF5BP33176 963 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 SLC35G1Q2M3R5 365 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 GSDMAQ96QA5 445 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 SYNRGQ9UMZ2 1314 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 SBF2Q86WG5 1849 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 ARHGAP6O43182 974 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 CDC25AP30304 524 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 RFC4P35249 363 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 GRAPQ13588 217 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 SPATA1Q5VX52 437 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 WDR66Q8TBY9 1149 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
CRTC3-210ENST00000560927 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 CGNQ9P2M7 1197 aaKnown RBP16.6■□□□□ 0.25
CRTC3-210ENST00000560927 MTMR7Q9Y216 660 aa16.6■□□□□ 0.25
CRTC3-210ENST00000560927 TOM1O60784 492 aa16.59■□□□□ 0.25
CRTC3-210ENST00000560927 TRAPPC10P48553 1259 aa16.59■□□□□ 0.25
CRTC3-210ENST00000560927 PDXDC2PQ6P474 469 aa16.59■□□□□ 0.25
CRTC3-210ENST00000560927 MKNK2Q9HBH9 465 aa16.59■□□□□ 0.25
CRTC3-210ENST00000560927 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms