RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 SCN9AQ15858 1988 aa27.39■■□□□ 1.98
PIF1-208ENST00000560444 NFIAQ12857 509 aa27.39■■□□□ 1.98
PIF1-208ENST00000560444 SNW1Q13573 536 aaKnown RBP27.39■■□□□ 1.98
PIF1-208ENST00000560444 RSBN1LQ6PCB5 846 aaPredicted RBP27.39■■□□□ 1.98
PIF1-208ENST00000560444 CCDC17Q96LX7 622 aa27.39■■□□□ 1.98
PIF1-208ENST00000560444 MTMR4Q9NYA4 1195 aa27.39■■□□□ 1.98
PIF1-208ENST00000560444 IGKV6D-41A0A0C4DH26 115 aa27.38■■□□□ 1.97
PIF1-208ENST00000560444 VIL1P09327 827 aaKnown RBP27.38■■□□□ 1.97
PIF1-208ENST00000560444 UVSSAQ2YD98 709 aa27.38■■□□□ 1.97
PIF1-208ENST00000560444 GOLPH3LQ9H4A5 285 aa27.38■■□□□ 1.97
PIF1-208ENST00000560444 CMA1P23946 247 aa27.38■■□□□ 1.97
PIF1-208ENST00000560444 CAMK4Q16566 473 aa27.38■■□□□ 1.97
PIF1-208ENST00000560444 STAG2Q8N3U4 1231 aa27.38■■□□□ 1.97
PIF1-208ENST00000560444 SHISA4Q96DD7 197 aa27.38■■□□□ 1.97
PIF1-208ENST00000560444 PI4KBQ9UBF8 816 aa27.38■■□□□ 1.97
PIF1-208ENST00000560444 hCG_1642624A0A1W2PR95 340 aa27.37■■□□□ 1.97
PIF1-208ENST00000560444 SHMT1P34896 483 aa27.37■■□□□ 1.97
PIF1-208ENST00000560444 DALRD3Q5D0E6 543 aaKnown RBP27.37■■□□□ 1.97
PIF1-208ENST00000560444 AXDND1Q5T1B0 1012 aaPredicted RBP27.37■■□□□ 1.97
PIF1-208ENST00000560444 FAM198AQ9UFP1 575 aa27.37■■□□□ 1.97
PIF1-208ENST00000560444 CEP131Q9UPN4 1083 aa27.37■■□□□ 1.97
PIF1-208ENST00000560444 MORC2Q9Y6X9 1032 aaPredicted RBP27.37■■□□□ 1.97
PIF1-208ENST00000560444 KINO60870 393 aaKnown RBP27.36■■□□□ 1.97
PIF1-208ENST00000560444 ENTPD3O75355 529 aa27.36■■□□□ 1.97
PIF1-208ENST00000560444 PARP1P09874 1014 aaKnown RBP27.36■■□□□ 1.97
PIF1-208ENST00000560444 TOB1P50616 345 aaPredicted RBP27.36■■□□□ 1.97
PIF1-208ENST00000560444 NR5A1Q13285 461 aa27.36■■□□□ 1.97
PIF1-208ENST00000560444 CFAP100Q494V2 611 aa27.36■■□□□ 1.97
PIF1-208ENST00000560444 FOXP4Q8IVH2 680 aaPredicted RBP27.36■■□□□ 1.97
PIF1-208ENST00000560444 OXER1Q8TDS5 423 aa27.36■■□□□ 1.97
PIF1-208ENST00000560444 SPZ1Q9BXG8 430 aa27.36■■□□□ 1.97
PIF1-208ENST00000560444 ZNF277Q9NRM2 450 aaPredicted RBP27.36■■□□□ 1.97
PIF1-208ENST00000560444 AKR1B1P15121 316 aa27.35■■□□□ 1.97
PIF1-208ENST00000560444 CALML3P27482 149 aa27.35■■□□□ 1.97
PIF1-208ENST00000560444 CCDC173Q0VFZ6 552 aa27.35■■□□□ 1.97
PIF1-208ENST00000560444 FMR1NBQ8N0W7 255 aaPredicted RBP27.35■■□□□ 1.97
PIF1-208ENST00000560444 NLGN2Q8NFZ4 835 aa27.35■■□□□ 1.97
PIF1-208ENST00000560444 HDAC9Q9UKV0 1011 aa27.35■■□□□ 1.97
PIF1-208ENST00000560444 CABP5Q9NP86 173 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 ZNRF3Q9ULT6 936 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 PCDHAC2Q9Y5I4 1007 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 ADAMTSL1Q8N6G6 1762 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 KLRF2D3W0D1 207 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 CUTAO60888 179 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 TTLL1O95922 423 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 NLRP5P59047 1200 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 ZFPM1Q8IX07 1006 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 PPP1R9BQ96SB3 815 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 GMLQ99445 158 aa27.34■■□□□ 1.97
PIF1-208ENST00000560444 GALNT17Q6IS24 598 aa27.33■■□□□ 1.97
PIF1-208ENST00000560444 TNFRSF25Q93038 417 aa27.33■■□□□ 1.97
PIF1-208ENST00000560444 NOL7Q9UMY1 257 aaKnown RBP27.33■■□□□ 1.97
PIF1-208ENST00000560444 FAM237AA0A1B0GTK4 181 aa27.32■■□□□ 1.96
PIF1-208ENST00000560444 PSMD14O00487 310 aa27.32■■□□□ 1.96
PIF1-208ENST00000560444 MARCKSP29966 332 aaPredicted RBP27.32■■□□□ 1.96
PIF1-208ENST00000560444 NPY5RQ15761 445 aa27.32■■□□□ 1.96
PIF1-208ENST00000560444 METTL16Q86W50 562 aaKnown RBP27.32■■□□□ 1.96
PIF1-208ENST00000560444 NIM1KQ8IY84 436 aa27.32■■□□□ 1.96
PIF1-208ENST00000560444 RNF214Q8ND24 703 aa27.32■■□□□ 1.96
PIF1-208ENST00000560444 PRMT6Q96LA8 375 aaPredicted RBP27.32■■□□□ 1.96
PIF1-208ENST00000560444 MYH6P13533 1939 aa27.32■■□□□ 1.96
PIF1-208ENST00000560444 COL2A1P02458 1487 aaPredicted RBP27.32■■□□□ 1.96
PIF1-208ENST00000560444 A0A1B0GVL5 298 aa27.31■■□□□ 1.96
PIF1-208ENST00000560444 BMP15O95972 392 aa27.31■■□□□ 1.96
PIF1-208ENST00000560444 NDUFA8P51970 172 aa27.31■■□□□ 1.96
PIF1-208ENST00000560444 TCP10Q12799 353 aa27.31■■□□□ 1.96
PIF1-208ENST00000560444 SASS6Q6UVJ0 657 aa27.31■■□□□ 1.96
PIF1-208ENST00000560444 OGFOD1Q8N543 542 aa27.31■■□□□ 1.96
PIF1-208ENST00000560444 TDRD3Q9H7E2 651 aaKnown RBP27.31■■□□□ 1.96
PIF1-208ENST00000560444 BCS1LQ9Y276 419 aa27.31■■□□□ 1.96
PIF1-208ENST00000560444 ATRNL1Q5VV63 1379 aa27.31■■□□□ 1.96
PIF1-208ENST00000560444 DDTLA6NHG4 134 aaPredicted RBP27.3■■□□□ 1.96
PIF1-208ENST00000560444 CYTH3O43739 400 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 RAD17O75943 681 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 CACNB3P54284 484 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 TYRO3Q06418 890 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 ASPRV1Q53RT3 343 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 CKAP2LQ8IYA6 745 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 KRI1Q8N9T8 703 aaKnown RBP27.3■■□□□ 1.96
PIF1-208ENST00000560444 AGBL3Q8NEM8 1001 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 CCDC148Q8NFR7 591 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 TRIM34Q9BYJ4 488 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 PSME4Q14997 1843 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 SNHG28P0DPA3 235 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 TRAPPC10P48553 1259 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 SH3BP5LQ7L8J4 393 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 ZSCAN29Q8IWY8 852 aaPredicted RBP27.3■■□□□ 1.96
PIF1-208ENST00000560444 TMOD2Q9NZR1 351 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 CLIP2Q9UDT6 1046 aa27.3■■□□□ 1.96
PIF1-208ENST00000560444 BRCA1P38398 1863 aaKnown RBP27.3■■□□□ 1.96
PIF1-208ENST00000560444 TRIM75PA6NK02 468 aa27.29■■□□□ 1.96
PIF1-208ENST00000560444 CAVIN2O95810 425 aa27.29■■□□□ 1.96
PIF1-208ENST00000560444 TATDN1Q6P1N9 297 aa27.29■■□□□ 1.96
PIF1-208ENST00000560444 TIGD1Q96MW7 591 aa27.29■■□□□ 1.96
PIF1-208ENST00000560444 BARHL2Q9NY43 387 aa27.29■■□□□ 1.96
PIF1-208ENST00000560444 SPDYE2BA6NHP3 402 aa27.28■■□□□ 1.96
PIF1-208ENST00000560444 SPDYE6P0CI01 402 aa27.28■■□□□ 1.96
PIF1-208ENST00000560444 PDHBP11177 359 aa27.28■■□□□ 1.96
PIF1-208ENST00000560444 PTPREP23469 700 aa27.28■■□□□ 1.96
PIF1-208ENST00000560444 SLC35G1Q2M3R5 365 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms