RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 DPP9Q86TI2 863 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 ADPGKQ9BRR6 497 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 TMC4Q7Z404 712 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 RDH13Q8NBN7 331 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 SSH3Q8TE77 659 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 CCDC6Q16204 474 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 DYNC1I1O14576 645 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 SEMA3EO15041 775 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 ZBTB24O43167 697 aaPredicted RBP14.94□□□□□ -0.02
TRAF3-208ENST00000560371 GTF2F1P35269 517 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRAF3-208ENST00000560371 BIRC2Q13490 618 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 CCPG1Q9ULG6 757 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 ZBTB8OSQ8IWT0 167 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 ZBTB1Q9Y2K1 713 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 JAK2O60674 1132 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 SLFN12Q8IYM2 578 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 SELENOSQ9BQE4 189 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 WDR17Q8IZU2 1322 aa14.94□□□□□ -0.02
TRAF3-208ENST00000560371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.93□□□□□ -0.02
TRAF3-208ENST00000560371 PCP11498 1178 aaKnown RBP14.93□□□□□ -0.02
TRAF3-208ENST00000560371 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 KRT26Q7Z3Y9 468 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 CMTR1Q8N1G2 835 aaKnown RBP14.93□□□□□ -0.02
TRAF3-208ENST00000560371 EAF2Q96CJ1 260 aaPredicted RBP14.93□□□□□ -0.02
TRAF3-208ENST00000560371 FGAP02671 866 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 GABPAQ06546 454 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 CEP128Q6ZU80 1094 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 CCDC84Q86UT8 332 aaPredicted RBP14.93□□□□□ -0.02
TRAF3-208ENST00000560371 SPATA24Q86W54 205 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 NELFCDQ8IXH7 590 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 SMC6Q96SB8 1091 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 KIF24Q5T7B8 1368 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 CLRN2A0PK11 232 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 UAP1Q16222 522 aaPredicted RBP14.93□□□□□ -0.02
TRAF3-208ENST00000560371 CYP26C1Q6V0L0 522 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 PPP1R21Q6ZMI0 780 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 TRIM7Q9C029 511 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 CD2APQ9Y5K6 639 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 KDM2BQ8NHM5 1336 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 FAM102BQ5T8I3 360 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 BLIDQ8IZY5 108 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 CCDC17Q96LX7 622 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 PCDHB13Q9Y5F0 798 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 CFAP157Q5JU67 520 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 ANO3Q9BYT9 981 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 KCNK9Q9NPC2 374 aa14.93□□□□□ -0.02
TRAF3-208ENST00000560371 METP08581 1390 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 ANKARQ7Z5J8 1434 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 SUGCTQ9HAC7 445 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 HSPA4P34932 840 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 ZNF365Q70YC5 407 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 STAMQ92783 540 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 CALCOCO1Q9P1Z2 691 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 TTLL3Q9Y4R7 772 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
TRAF3-208ENST00000560371 HSPD1P10809 573 aaKnown RBP14.92□□□□□ -0.02
TRAF3-208ENST00000560371 CCNA1P78396 465 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 ATP2C2O75185 946 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 RHOXF2BP0C7M4 288 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 TECP42680 631 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 PHKA1P46020 1223 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 KCNQ4P56696 695 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 BEND3Q5T5X7 828 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 ZNF274Q96GC6 653 aaPredicted RBP14.92□□□□□ -0.02
TRAF3-208ENST00000560371 RHOXF2Q9BQY4 288 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 TM6SF1Q9BZW5 370 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
TRAF3-208ENST00000560371 MAGI2Q86UL8 1455 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 TNKSO95271 1327 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 TUBBP07437 444 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 SLFN13Q68D06 897 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 FANCBQ8NB91 859 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 CCT6BQ92526 530 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 ACTN4O43707 911 aaKnown RBP14.92□□□□□ -0.02
TRAF3-208ENST00000560371 ZNF526Q8TF50 670 aaPredicted RBP14.92□□□□□ -0.02
TRAF3-208ENST00000560371 STIM2Q9P246 746 aa14.92□□□□□ -0.02
TRAF3-208ENST00000560371 YWHAEP62258 255 aaKnown RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 IRX5P78411 483 aaPredicted RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 FAM193BQ96PV7 902 aaPredicted RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 YARSP54577 528 aaKnown RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 XKR9Q5GH70 373 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 UBLCP1Q8WVY7 318 aaPredicted RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 PALM3A6NDB9 673 aaPredicted RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 GIPC1O14908 333 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 NELFBQ8WX92 580 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 DBNDD1Q9H9R9 158 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 SWAP70Q9UH65 585 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 USTQ9Y2C2 406 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 PCDHA1Q9Y5I3 950 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 ATP10DQ9P241 1426 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 LIG4P49917 911 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 ST7Q9NRC1 585 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 DDX25Q9UHL0 483 aaKnown RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 ALDH3A1P30838 453 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 SYT10Q6XYQ8 523 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 CDC37L1Q7L3B6 337 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 UTP11Q9Y3A2 253 aaKnown RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 GNA14O95837 355 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 GPBP1Q86WP2 473 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms