RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	DZIP1	Q86YF9	867 aa	Known RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	LRRN4CL	Q8ND94	238 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	TIGD1	Q96MW7	591 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	RNF26	Q9BY78	433 aa	Predicted RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	GTPBP4	Q9BZE4	634 aa	Known RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	NYX	Q9GZU5	481 aa		6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	SAMSN1	Q9NSI8	373 aa	Known RBP	6.61	□□□□□ -1.35
LRRC49-223	ENST00000560369	TSPY2	A6NKD2	308 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	FANCG	O15287	622 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	PRPF3	O43395	683 aa	Known RBP	6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	CYTH3	O43739	400 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	CAVIN2	O95810	425 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	STX17	P56962	302 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	POSTN	Q15063	836 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	ZRSR1	Q15695	479 aa	Known RBP	6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	PIK3AP1	Q6ZUJ8	805 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	IQCA1	Q86XH1	822 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	CLEC10A	Q8IUN9	316 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	SYMPK	Q92797	1274 aa	Known RBP	6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	BPIFA3	Q9BQP9	254 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	CRNKL1	Q9BZJ0	848 aa	Known RBP	6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	NAT10	Q9H0A0	1025 aa	Known RBP	6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	SRPRB	Q9Y5M8	271 aa	Known RBP	6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	SMCHD1	A6NHR9	2005 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	VWA3A	A6NCI4	1184 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	PP2D1	A8MPX8	630 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	ORC4	O43929	436 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	TPM3	P06753	285 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	GYS1	P13807	737 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	KRT2	P35908	639 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	SARS	P49591	514 aa	Known RBP	6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	DDR1	Q08345	913 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	PTGDR	Q13258	359 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	RILPL1	Q5EBL4	403 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	C12orf60	Q5U649	245 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	TMTC2	Q8N394	836 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	JMY	Q8N9B5	988 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	CNBD1	Q8NA66	436 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	WASF1	Q92558	559 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	GJD4	Q96KN9	370 aa	Predicted RBP	6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	MTR	Q99707	1265 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	ANKRD2	Q9GZV1	360 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	BLZF1	Q9H2G9	400 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	POLL	Q9UGP5	575 aa		6.6	□□□□□ -1.35
LRRC49-223	ENST00000560369	AFF2	P51816	1311 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	CCDC196	A0A1B0GTZ2	297 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	LDHB	P07195	334 aa	Known RBP	6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	MCM7	P33993	719 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	USP5	P45974	858 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	UBASH3A	P57075	661 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	AKAP17A	Q02040	695 aa	Known RBP	6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	MYL5	Q02045	173 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	GRAP	Q13588	217 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	KLHL10	Q6JEL2	608 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	ZNF771	Q7L3S4	317 aa	Predicted RBP	6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	SEPT12	Q8IYM1	358 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	CCAR2	Q8N163	923 aa	Known RBP	6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	GRAPL	Q8TC17	118 aa	Predicted RBP	6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	LRRC15	Q8TF66	581 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	PLIN2	Q99541	437 aa		6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	OSBPL5	Q9H0X9	879 aa	Predicted RBP	6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	ZNF219	Q9P2Y4	722 aa	Predicted RBP	6.59	□□□□□ -1.35
LRRC49-223	ENST00000560369	FOCAD	Q5VW36	1801 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369		A0A0U1RQJ8	604 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	TRIM75P	A6NK02	468 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	RIMBP2	O15034	1052 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	SEMA3E	O15041	775 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	UFL1	O94874	794 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	MORC3	Q14149	939 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	TTC38	Q5R3I4	469 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	NYAP1	Q6ZVC0	841 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	PROM2	Q8N271	834 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	ATRIP	Q8WXE1	791 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	PAGE5	Q96GU1	130 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	RTFDC1	Q9BY42	306 aa	Predicted RBP	6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	TMX1	Q9H3N1	280 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	ATP8A2	Q9NTI2	1148 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	MAD2L2	Q9UI95	211 aa		6.59	□□□□□ -1.36
LRRC49-223	ENST00000560369	SMTNL1	A8MU46	457 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369		F8W031	263 aa	Predicted RBP	6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	IKBKB	O14920	756 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	TEX33	O43247	280 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	TRIM37	O94972	964 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	SERPINC1	P01008	464 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	SERPINB2	P05120	415 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	SCG2	P13521	617 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	RASA1	P20936	1047 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	HSPA1L	P34931	641 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	ADK	P55263	362 aa	Known RBP	6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	NLRP5	P59047	1200 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	CFAP100	Q494V2	611 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	SBK1	Q52WX2	424 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	CEP135	Q66GS9	1140 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	PNMA1	Q8ND90	353 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	TMEM60	Q9H2L4	133 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	CD209	Q9NNX6	404 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	MAPK8IP1	Q9UQF2	711 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	NFE2L3	Q9Y4A8	694 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	PCDHAC2	Q9Y5I4	1007 aa		6.58	□□□□□ -1.36
LRRC49-223	ENST00000560369	XDH	P47989	1333 aa		6.58	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms