RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 EPHB4P54760 987 aa20.28■□□□□ 0.84
HERC1-207ENST00000560316 TLE2Q04725 743 aa20.28■□□□□ 0.84
HERC1-207ENST00000560316 FAM47AQ5JRC9 791 aa20.28■□□□□ 0.84
HERC1-207ENST00000560316 ARHGAP45Q92619 1136 aa20.28■□□□□ 0.84
HERC1-207ENST00000560316 RNPC3Q96LT9 517 aaKnown RBP20.28■□□□□ 0.84
HERC1-207ENST00000560316 TNNQ9UQP3 1299 aa20.28■□□□□ 0.84
HERC1-207ENST00000560316 STRNO43815 780 aa20.27■□□□□ 0.84
HERC1-207ENST00000560316 IDH1O75874 414 aaKnown RBP20.27■□□□□ 0.84
HERC1-207ENST00000560316 COG2Q14746 738 aa20.27■□□□□ 0.84
HERC1-207ENST00000560316 SEPT2Q15019 361 aa20.27■□□□□ 0.84
HERC1-207ENST00000560316 USP38Q8NB14 1042 aa20.27■□□□□ 0.84
HERC1-207ENST00000560316 SPATC1LQ9H0A9 340 aa20.27■□□□□ 0.84
HERC1-207ENST00000560316 GPR108Q9NPR9 543 aa20.27■□□□□ 0.84
HERC1-207ENST00000560316 ZNF236Q9UL36 1845 aa20.26■□□□□ 0.83
HERC1-207ENST00000560316 PLCD1P51178 756 aa20.26■□□□□ 0.83
HERC1-207ENST00000560316 OS9Q13438 667 aaPredicted RBP20.26■□□□□ 0.83
HERC1-207ENST00000560316 GRIN2CQ14957 1233 aa20.26■□□□□ 0.83
HERC1-207ENST00000560316 C1orf53Q5VUE5 145 aa20.26■□□□□ 0.83
HERC1-207ENST00000560316 TTC6Q86TZ1 520 aa20.26■□□□□ 0.83
HERC1-207ENST00000560316 MAGEB6Q8N7X4 407 aa20.26■□□□□ 0.83
HERC1-207ENST00000560316 TANGO6Q9C0B7 1094 aa20.26■□□□□ 0.83
HERC1-207ENST00000560316 A0A1W2PRG0 241 aa20.25■□□□□ 0.83
HERC1-207ENST00000560316 ZNF512BQ96KM6 892 aaPredicted RBP20.25■□□□□ 0.83
HERC1-207ENST00000560316 HOXC10Q9NYD6 342 aa20.25■□□□□ 0.83
HERC1-207ENST00000560316 TLR7Q9NYK1 1049 aaKnown RBP20.25■□□□□ 0.83
HERC1-207ENST00000560316 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
HERC1-207ENST00000560316 TMEM265A0A087WTH1 108 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 IGSF3O75054 1194 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 CLTBP09497 229 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 COL9A1P20849 921 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 PLS1Q14651 629 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 TJAP1Q5JTD0 557 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 SHCBP1Q8NEM2 672 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 MAML3Q96JK9 1138 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 SLC5A4Q9NY91 659 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 DBNLQ9UJU6 430 aaKnown RBP20.24■□□□□ 0.83
HERC1-207ENST00000560316 PHF24Q9UPV7 400 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 MUC3AQ02505 3323 aa20.24■□□□□ 0.83
HERC1-207ENST00000560316 TRIM27P14373 513 aa20.23■□□□□ 0.83
HERC1-207ENST00000560316 EVX2Q03828 476 aa20.23■□□□□ 0.83
HERC1-207ENST00000560316 POLA2Q14181 598 aa20.23■□□□□ 0.83
HERC1-207ENST00000560316 KIAA1755Q5JYT7 1200 aa20.23■□□□□ 0.83
HERC1-207ENST00000560316 NCAPG2Q86XI2 1143 aa20.23■□□□□ 0.83
HERC1-207ENST00000560316 CERS3Q8IU89 383 aa20.23■□□□□ 0.83
HERC1-207ENST00000560316 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
HERC1-207ENST00000560316 TNFRSF10AO00220 468 aa20.22■□□□□ 0.83
HERC1-207ENST00000560316 MPHOSPH10O00566 681 aaKnown RBP20.22■□□□□ 0.83
HERC1-207ENST00000560316 PQBP1O60828 265 aaKnown RBP20.22■□□□□ 0.83
HERC1-207ENST00000560316 RAG1P15918 1043 aa20.22■□□□□ 0.83
HERC1-207ENST00000560316 MROH8Q9H579 483 aa20.22■□□□□ 0.83
HERC1-207ENST00000560316 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
HERC1-207ENST00000560316 XPNPEP3Q9NQH7 507 aa20.22■□□□□ 0.83
HERC1-207ENST00000560316 KIAA0355O15063 1070 aa20.21■□□□□ 0.83
HERC1-207ENST00000560316 SURF6O75683 361 aaKnown RBP20.21■□□□□ 0.83
HERC1-207ENST00000560316 PGK1P00558 417 aa20.21■□□□□ 0.83
HERC1-207ENST00000560316 POLR3DP05423 398 aaPredicted RBP20.21■□□□□ 0.83
HERC1-207ENST00000560316 DNAJB2P25686 324 aa20.21■□□□□ 0.83
HERC1-207ENST00000560316 FPGSQ05932 587 aa20.21■□□□□ 0.83
HERC1-207ENST00000560316 SAMD1Q6SPF0 538 aaPredicted RBP20.21■□□□□ 0.83
HERC1-207ENST00000560316 CLUAP1Q96AJ1 413 aa20.21■□□□□ 0.83
HERC1-207ENST00000560316 RAPGEFL1Q9UHV5 662 aa20.21■□□□□ 0.83
HERC1-207ENST00000560316 A0A0G2JMZ2 1700 aa20.21■□□□□ 0.83
HERC1-207ENST00000560316 SMCHD1A6NHR9 2005 aa20.2■□□□□ 0.83
HERC1-207ENST00000560316 A0A1W2PQ45 241 aaPredicted RBP20.2■□□□□ 0.82
HERC1-207ENST00000560316 A0A1W2PQY0 241 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
HERC1-207ENST00000560316 BCAR3O75815 825 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 RARBP10826 455 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 DSG3P32926 999 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 GABPAQ06546 454 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 ABRAQ8N0Z2 381 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 MB21D1Q8N884 522 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 ATG4CQ96DT6 458 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 ZNF576Q9H609 170 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 TMEM39AQ9NV64 488 aa20.2■□□□□ 0.82
HERC1-207ENST00000560316 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.19■□□□□ 0.82
HERC1-207ENST00000560316 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.19■□□□□ 0.82
HERC1-207ENST00000560316 FLOT1O75955 427 aa20.19■□□□□ 0.82
HERC1-207ENST00000560316 FCER1AP12319 257 aa20.19■□□□□ 0.82
HERC1-207ENST00000560316 TAL1P17542 331 aaPredicted RBP20.19■□□□□ 0.82
HERC1-207ENST00000560316 RNF180Q86T96 592 aa20.19■□□□□ 0.82
HERC1-207ENST00000560316 SPICE1Q8N0Z3 855 aa20.19■□□□□ 0.82
HERC1-207ENST00000560316 SSH3Q8TE77 659 aa20.19■□□□□ 0.82
HERC1-207ENST00000560316 FRAT1Q92837 279 aaPredicted RBP20.19■□□□□ 0.82
HERC1-207ENST00000560316 LENG1Q96BZ8 264 aaPredicted RBP20.19■□□□□ 0.82
HERC1-207ENST00000560316 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
HERC1-207ENST00000560316 IPO8O15397 1037 aaKnown RBP20.18■□□□□ 0.82
HERC1-207ENST00000560316 PGK2P07205 417 aa20.18■□□□□ 0.82
HERC1-207ENST00000560316 MAP3K12Q12852 859 aa20.18■□□□□ 0.82
HERC1-207ENST00000560316 CLEC10AQ8IUN9 316 aa20.18■□□□□ 0.82
HERC1-207ENST00000560316 PPM1EQ8WY54 764 aa20.18■□□□□ 0.82
HERC1-207ENST00000560316 EAF2Q96CJ1 260 aaPredicted RBP20.18■□□□□ 0.82
HERC1-207ENST00000560316 ATP8B2P98198 1209 aa20.17■□□□□ 0.82
HERC1-207ENST00000560316 FAAP100Q0VG06 881 aa20.17■□□□□ 0.82
HERC1-207ENST00000560316 SLC44A5Q8NCS7 719 aa20.17■□□□□ 0.82
HERC1-207ENST00000560316 TIFAQ96CG3 184 aa20.17■□□□□ 0.82
HERC1-207ENST00000560316 C1orf115Q9H7X2 142 aa20.17■□□□□ 0.82
HERC1-207ENST00000560316 MCM9Q9NXL9 1143 aa20.17■□□□□ 0.82
HERC1-207ENST00000560316 MAGEB6P1A0A0J9YX57 407 aa20.16■□□□□ 0.82
HERC1-207ENST00000560316 TMEM132BQ14DG7 1078 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms