RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 NAPBQ9H115 298 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 SH2D4AQ9H788 454 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 MKNK2Q9HBH9 465 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.76■□□□□ 0.117e-6■■□□□ 13
SMAD3-213ENST00000560175 PLIN4Q96Q06 1357 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 CNMDO75829 334 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 FGAP02671 866 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 HSPD1P10809 573 aaKnown RBP15.75■□□□□ 0.11
SMAD3-213ENST00000560175 FLT3LGP49771 235 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 ERVK-9P63128 1117 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 ERVK-24P63145 666 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 COG2Q14746 738 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 SLC9C1Q4G0N8 1177 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 ZNF589Q86UQ0 364 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-213ENST00000560175 CLEC10AQ8IUN9 316 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 PXYLP1Q8TE99 480 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 RILPL2Q969X0 211 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-213ENST00000560175 HOXC10Q9NYD6 342 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 SYNPO2Q9UMS6 1093 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 ADAMTS5Q9UNA0 930 aa15.75■□□□□ 0.11
SMAD3-213ENST00000560175 TNRC18O15417 2968 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-213ENST00000560175 MYH4Q9Y623 1939 aa15.74■□□□□ 0.11
SMAD3-213ENST00000560175 A0A0G2JMZ2 1700 aa15.74■□□□□ 0.11
SMAD3-213ENST00000560175 SPDYE16A6NNV3 312 aaPredicted RBP15.74■□□□□ 0.11
SMAD3-213ENST00000560175 TNPO2O14787 897 aaKnown RBP15.74■□□□□ 0.11
SMAD3-213ENST00000560175 GRK4P32298 578 aa15.74■□□□□ 0.11
SMAD3-213ENST00000560175 PDE4BQ07343 736 aa15.74■□□□□ 0.11
SMAD3-213ENST00000560175 ZNF444Q8N0Y2 327 aaPredicted RBP15.74■□□□□ 0.11
SMAD3-213ENST00000560175 NEDD1Q8NHV4 660 aa15.74■□□□□ 0.11
SMAD3-213ENST00000560175 COA7Q96BR5 231 aa15.74■□□□□ 0.11
SMAD3-213ENST00000560175 TACC3Q9Y6A5 838 aa15.74■□□□□ 0.11
SMAD3-213ENST00000560175 CCDC171Q6TFL3 1326 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 HIP1O00291 1037 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 WDR46O15213 610 aaKnown RBP15.73■□□□□ 0.11
SMAD3-213ENST00000560175 PEX10O60683 326 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 SLC3A2P08195 630 aaKnown RBP15.73■□□□□ 0.11
SMAD3-213ENST00000560175 NOVP48745 357 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 SOX10P56693 466 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 SLAIN1Q8ND83 568 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 RAET1EQ8TD07 263 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 USP6NLQ92738 828 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 MTMR4Q9NYA4 1195 aa15.73■□□□□ 0.11
SMAD3-213ENST00000560175 MKI67P46013 3256 aaKnown RBP15.72■□□□□ 0.11
SMAD3-213ENST00000560175 ORC4O43929 436 aa15.72■□□□□ 0.11
SMAD3-213ENST00000560175 GSPT1P15170 499 aaKnown RBP15.72■□□□□ 0.11
SMAD3-213ENST00000560175 MAPK4P31152 587 aa15.72■□□□□ 0.11
SMAD3-213ENST00000560175 DSG3P32926 999 aa15.72■□□□□ 0.11
SMAD3-213ENST00000560175 TTC22Q5TAA0 569 aa15.72■□□□□ 0.11
SMAD3-213ENST00000560175 SH3TC2Q8TF17 1288 aa15.72■□□□□ 0.11
SMAD3-213ENST00000560175 PORCNQ9H237 461 aa15.72■□□□□ 0.11
SMAD3-213ENST00000560175 BTBD7Q9P203 1132 aa15.72■□□□□ 0.11
SMAD3-213ENST00000560175 POTEFA5A3E0 1075 aa15.71■□□□□ 0.11
SMAD3-213ENST00000560175 ADCY3O60266 1144 aa15.71■□□□□ 0.11
SMAD3-213ENST00000560175 PRDM1O75626 825 aa15.71■□□□□ 0.11
SMAD3-213ENST00000560175 ECM2O94769 699 aaPredicted RBP15.71■□□□□ 0.11
SMAD3-213ENST00000560175 XRCC5P13010 732 aaKnown RBP15.71■□□□□ 0.11
SMAD3-213ENST00000560175 MFAP1P55081 439 aaKnown RBP15.71■□□□□ 0.11
SMAD3-213ENST00000560175 MLLT1Q03111 559 aaPredicted RBP15.71■□□□□ 0.11
SMAD3-213ENST00000560175 STK11IPQ8N1F8 1099 aa15.71■□□□□ 0.11
SMAD3-213ENST00000560175 MB21D1Q8N884 522 aa15.71■□□□□ 0.11
SMAD3-213ENST00000560175 CEP95Q96GE4 821 aa15.71■□□□□ 0.11
SMAD3-213ENST00000560175 F5H6K3 240 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 TFAP4Q01664 338 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 CTDSPL2Q05D32 466 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 KLRC3Q07444 240 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 MORN1Q5T089 497 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 GOPCQ9HD26 462 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 INCENPQ9NQS7 918 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 IL17RBQ9NRM6 502 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 CLIP2Q9UDT6 1046 aa15.7■□□□□ 0.1
SMAD3-213ENST00000560175 COL11A1P12107 1806 aaPredicted RBP15.7■□□□□ 0.1
SMAD3-213ENST00000560175 TTLL1O95922 423 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 PCP11498 1178 aaKnown RBP15.69■□□□□ 0.1
SMAD3-213ENST00000560175 CCNA1P78396 465 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 MTFR1Q15390 333 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
SMAD3-213ENST00000560175 GPR142Q7Z601 462 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 SPICE1Q8N0Z3 855 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 GMCL1P1Q8NEA9 526 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 PAGR1Q9BTK6 254 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 DSCC1Q9BVC3 393 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 NBPF3Q9H094 633 aa15.69■□□□□ 0.1
SMAD3-213ENST00000560175 ZNFX1Q9P2E3 1918 aaKnown RBP15.68■□□□□ 0.1
SMAD3-213ENST00000560175 FLOT1O75955 427 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 IGHA2P01877 340 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 TSPY3P0CV98 308 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 TSPY8P0CW00 308 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 PPP4R3BQ5MIZ7 849 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 PLEKHH3Q7Z736 793 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 SHCBP1Q8NEM2 672 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 SOCS4Q8WXH5 440 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 NUDT12Q9BQG2 462 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 TMEM106CQ9BVX2 250 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 TANGO6Q9C0B7 1094 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 TCP11L1Q9NUJ3 509 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 PDE4DIPQ5VU43 2346 aa15.68■□□□□ 0.1
SMAD3-213ENST00000560175 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms