RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ANKRD45Q5TZF3 282 aa24.76■■□□□ 1.55
PSEN1-225ENST00000560005 PRDM6Q9NQX0 595 aa24.76■■□□□ 1.55
PSEN1-225ENST00000560005 USP14P54578 494 aa24.75■■□□□ 1.55
PSEN1-225ENST00000560005 TATDN1Q6P1N9 297 aa24.75■■□□□ 1.55
PSEN1-225ENST00000560005 LBX2Q6XYB7 198 aa24.75■■□□□ 1.55
PSEN1-225ENST00000560005 SLC39A5Q6ZMH5 540 aa24.75■■□□□ 1.55
PSEN1-225ENST00000560005 ARRDC4Q8NCT1 418 aa24.75■■□□□ 1.55
PSEN1-225ENST00000560005 BADQ92934 168 aa24.75■■□□□ 1.55
PSEN1-225ENST00000560005 TTYH1Q9H313 450 aaPredicted RBP24.75■■□□□ 1.55
PSEN1-225ENST00000560005 PNMA6EA0A0J9YXQ4 647 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 RAB11FIP3O75154 756 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 IGHA2P01877 340 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 POLA2Q14181 598 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 TRIM60Q495X7 471 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 ANO1Q5XXA6 986 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 ACER1Q8TDN7 264 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 DBNDD2Q9BQY9 259 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 KIAA1683Q9H0B3 1180 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 MYO5AQ9Y4I1 1855 aaKnown RBP24.74■■□□□ 1.55
PSEN1-225ENST00000560005 MUC3AQ02505 3323 aa24.74■■□□□ 1.55
PSEN1-225ENST00000560005 SPDYE16A6NNV3 312 aaPredicted RBP24.73■■□□□ 1.55
PSEN1-225ENST00000560005 KBTBD13C9JR72 458 aa24.73■■□□□ 1.55
PSEN1-225ENST00000560005 MYCNP04198 464 aaPredicted RBP24.73■■□□□ 1.55
PSEN1-225ENST00000560005 SMAD3P84022 425 aaKnown RBP24.73■■□□□ 1.55
PSEN1-225ENST00000560005 CCDC158Q5M9N0 1113 aa24.73■■□□□ 1.55
PSEN1-225ENST00000560005 DPP9Q86TI2 863 aa24.73■■□□□ 1.55
PSEN1-225ENST00000560005 RPAP3Q9H6T3 665 aaPredicted RBP24.73■■□□□ 1.55
PSEN1-225ENST00000560005 FOSL2P15408 326 aa24.72■■□□□ 1.55
PSEN1-225ENST00000560005 PIH1D3Q9NQM4 214 aaKnown RBP24.72■■□□□ 1.55
PSEN1-225ENST00000560005 SERPINB13Q9UIV8 391 aa24.72■■□□□ 1.55
PSEN1-225ENST00000560005 MYH1P12882 1939 aa24.72■■□□□ 1.55
PSEN1-225ENST00000560005 ZAP70P43403 619 aa24.71■■□□□ 1.55
PSEN1-225ENST00000560005 SNX17Q15036 470 aa24.71■■□□□ 1.55
PSEN1-225ENST00000560005 ABCB5Q2M3G0 1257 aa24.71■■□□□ 1.55
PSEN1-225ENST00000560005 TNNI3KQ59H18 835 aa24.71■■□□□ 1.55
PSEN1-225ENST00000560005 PDLIM7Q9NR12 457 aa24.71■■□□□ 1.55
PSEN1-225ENST00000560005 FPGT-TNNI3KV9GXZ4 949 aa24.71■■□□□ 1.55
PSEN1-225ENST00000560005 CYP7A1P22680 504 aa24.7■■□□□ 1.54
PSEN1-225ENST00000560005 ADORA2AP29274 412 aa24.7■■□□□ 1.54
PSEN1-225ENST00000560005 USP5P45974 858 aa24.7■■□□□ 1.54
PSEN1-225ENST00000560005 CERKLQ49MI3 558 aaPredicted RBP24.7■■□□□ 1.54
PSEN1-225ENST00000560005 SH3RF1Q7Z6J0 888 aa24.7■■□□□ 1.54
PSEN1-225ENST00000560005 MIGA1Q8NAN2 632 aa24.7■■□□□ 1.54
PSEN1-225ENST00000560005 TRIM43BA6NCK2 446 aa24.69■■□□□ 1.54
PSEN1-225ENST00000560005 ADCYAP1R1P41586 468 aa24.69■■□□□ 1.54
PSEN1-225ENST00000560005 OLFML2BQ68BL8 750 aa24.69■■□□□ 1.54
PSEN1-225ENST00000560005 FERMT2Q96AC1 680 aa24.69■■□□□ 1.54
PSEN1-225ENST00000560005 TRIM43Q96BQ3 446 aaPredicted RBP24.69■■□□□ 1.54
PSEN1-225ENST00000560005 MOV10L1Q9BXT6 1211 aaKnown RBP24.69■■□□□ 1.54
PSEN1-225ENST00000560005 EHD4Q9H223 541 aa24.69■■□□□ 1.54
PSEN1-225ENST00000560005 GPR108Q9NPR9 543 aa24.69■■□□□ 1.54
PSEN1-225ENST00000560005 ZNF236Q9UL36 1845 aa24.68■■□□□ 1.54
PSEN1-225ENST00000560005 SEPT4O43236 478 aa24.68■■□□□ 1.54
PSEN1-225ENST00000560005 LNPKQ9C0E8 428 aa24.68■■□□□ 1.54
PSEN1-225ENST00000560005 CABP5Q9NP86 173 aa24.68■■□□□ 1.54
PSEN1-225ENST00000560005 NOP58Q9Y2X3 529 aaKnown RBP24.68■■□□□ 1.54
PSEN1-225ENST00000560005 IGSF3O75054 1194 aa24.67■■□□□ 1.54
PSEN1-225ENST00000560005 ERC1Q8IUD2 1116 aa24.67■■□□□ 1.54
PSEN1-225ENST00000560005 SYMPKQ92797 1274 aaKnown RBP24.67■■□□□ 1.54
PSEN1-225ENST00000560005 LRRCC1Q9C099 1032 aa24.67■■□□□ 1.54
PSEN1-225ENST00000560005 STRNO43815 780 aa24.66■■□□□ 1.54
PSEN1-225ENST00000560005 SURF6O75683 361 aaKnown RBP24.66■■□□□ 1.54
PSEN1-225ENST00000560005 IDH1O75874 414 aaKnown RBP24.66■■□□□ 1.54
PSEN1-225ENST00000560005 LRRC41Q15345 812 aa24.66■■□□□ 1.54
PSEN1-225ENST00000560005 PRAMEF19Q5SWL8 479 aa24.66■■□□□ 1.54
PSEN1-225ENST00000560005 TTC6Q86TZ1 520 aa24.66■■□□□ 1.54
PSEN1-225ENST00000560005 ZNF512BQ96KM6 892 aaPredicted RBP24.66■■□□□ 1.54
PSEN1-225ENST00000560005 SPATC1LQ9H0A9 340 aa24.66■■□□□ 1.54
PSEN1-225ENST00000560005 COBLO75128 1261 aa24.65■■□□□ 1.54
PSEN1-225ENST00000560005 ERCC3P19447 782 aa24.65■■□□□ 1.54
PSEN1-225ENST00000560005 GUCY1A2P33402 732 aa24.65■■□□□ 1.54
PSEN1-225ENST00000560005 SHMT1P34896 483 aa24.65■■□□□ 1.54
PSEN1-225ENST00000560005 TLE2Q04725 743 aa24.65■■□□□ 1.54
PSEN1-225ENST00000560005 OS9Q13438 667 aaPredicted RBP24.65■■□□□ 1.54
PSEN1-225ENST00000560005 C1orf53Q5VUE5 145 aa24.65■■□□□ 1.54
PSEN1-225ENST00000560005 ITGB8P26012 769 aa24.64■■□□□ 1.54
PSEN1-225ENST00000560005 COG2Q14746 738 aa24.64■■□□□ 1.54
PSEN1-225ENST00000560005 FAM47AQ5JRC9 791 aa24.64■■□□□ 1.54
PSEN1-225ENST00000560005 MAGEB6Q8N7X4 407 aa24.64■■□□□ 1.54
PSEN1-225ENST00000560005 RNPC3Q96LT9 517 aaKnown RBP24.64■■□□□ 1.54
PSEN1-225ENST00000560005 TANGO6Q9C0B7 1094 aa24.64■■□□□ 1.54
PSEN1-225ENST00000560005 PLCD1P51178 756 aa24.63■■□□□ 1.53
PSEN1-225ENST00000560005 EPHB4P54760 987 aa24.63■■□□□ 1.53
PSEN1-225ENST00000560005 SEPT2Q15019 361 aa24.63■■□□□ 1.53
PSEN1-225ENST00000560005 CERS3Q8IU89 383 aa24.63■■□□□ 1.53
PSEN1-225ENST00000560005 SHCBP1Q8NEM2 672 aa24.63■■□□□ 1.53
PSEN1-225ENST00000560005 KIF1BPQ96EK5 621 aa24.63■■□□□ 1.53
PSEN1-225ENST00000560005 HOXC10Q9NYD6 342 aa24.63■■□□□ 1.53
PSEN1-225ENST00000560005 DBNLQ9UJU6 430 aaKnown RBP24.63■■□□□ 1.53
PSEN1-225ENST00000560005 EXOC6BQ9Y2D4 811 aa24.63■■□□□ 1.53
PSEN1-225ENST00000560005 TMEM265A0A087WTH1 108 aa24.62■■□□□ 1.53
PSEN1-225ENST00000560005 A0A1W2PRG0 241 aa24.62■■□□□ 1.53
PSEN1-225ENST00000560005 PDE4AP27815 886 aa24.62■■□□□ 1.53
PSEN1-225ENST00000560005 SLC5A4Q9NY91 659 aa24.62■■□□□ 1.53
PSEN1-225ENST00000560005 TLR7Q9NYK1 1049 aaKnown RBP24.62■■□□□ 1.53
PSEN1-225ENST00000560005 TACC3Q9Y6A5 838 aa24.62■■□□□ 1.53
PSEN1-225ENST00000560005 A0A0G2JMZ2 1700 aa24.61■■□□□ 1.53
PSEN1-225ENST00000560005 CLTBP09497 229 aa24.61■■□□□ 1.53
PSEN1-225ENST00000560005 USP38Q8NB14 1042 aa24.61■■□□□ 1.53
PSEN1-225ENST00000560005 PLS1Q14651 629 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms