RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 EEF2P13639 858 aaKnown RBP11.02□□□□□ -0.65
HERC1-206ENST00000559996 PTPRAP18433 802 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 PDIA3P30101 505 aaKnown RBP11.02□□□□□ -0.65
HERC1-206ENST00000559996 TROAPQ12815 778 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 TMEM67Q5HYA8 995 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 ZNF467Q7Z7K2 595 aaPredicted RBP11.02□□□□□ -0.65
HERC1-206ENST00000559996 IQCA1Q86XH1 822 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 SCYL3Q8IZE3 742 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 HOOK2Q96ED9 719 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.65
HERC1-206ENST00000559996 CLMNQ96JQ2 1002 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 WRNIP1Q96S55 665 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 KANSL2Q9H9L4 492 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 GINM1Q9NU53 330 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 CLIP2Q9UDT6 1046 aa11.02□□□□□ -0.65
HERC1-206ENST00000559996 OTOFQ9HC10 1997 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 ATAD5Q96QE3 1844 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 UBE2Q2LH0YL09 131 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 MPHOSPH10O00566 681 aaKnown RBP11.01□□□□□ -0.65
HERC1-206ENST00000559996 PPP1R12BO60237 982 aaPredicted RBP11.01□□□□□ -0.65
HERC1-206ENST00000559996 TOMM70O94826 608 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 ASNSP08243 561 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 GJA5P36382 358 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 ECE1P42892 770 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 VGLL4Q14135 290 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 WTAPQ15007 396 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 APOA5Q6Q788 366 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 TMTC2Q8N394 836 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
HERC1-206ENST00000559996 TMX3Q96JJ7 454 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 TRIM34Q9BYJ4 488 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 LIMCH1Q9UPQ0 1083 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 TMX2Q9Y320 296 aa11.01□□□□□ -0.65
HERC1-206ENST00000559996 PFKFB2O60825 505 aa11□□□□□ -0.65
HERC1-206ENST00000559996 CELF2O95319 508 aaKnown RBP11□□□□□ -0.65
HERC1-206ENST00000559996 TTLL1O95922 423 aa11□□□□□ -0.65
HERC1-206ENST00000559996 SNHG28P0DPA3 235 aa11□□□□□ -0.65
HERC1-206ENST00000559996 CDC27P30260 824 aa11□□□□□ -0.65
HERC1-206ENST00000559996 IREB2P48200 963 aaKnown RBP11□□□□□ -0.65
HERC1-206ENST00000559996 CUL4AQ13619 759 aa11□□□□□ -0.65
HERC1-206ENST00000559996 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
HERC1-206ENST00000559996 SLC35G1Q2M3R5 365 aa11□□□□□ -0.65
HERC1-206ENST00000559996 CCDC178Q5BJE1 867 aa11□□□□□ -0.65
HERC1-206ENST00000559996 IFIT1BQ5T764 474 aaKnown RBP11□□□□□ -0.65
HERC1-206ENST00000559996 UBAC1Q9BSL1 405 aa11□□□□□ -0.65
HERC1-206ENST00000559996 MYL10Q9BUA6 226 aa11□□□□□ -0.65
HERC1-206ENST00000559996 WDR18Q9BV38 432 aa11□□□□□ -0.65
HERC1-206ENST00000559996 GBA2Q9HCG7 927 aaPredicted RBP11□□□□□ -0.65
HERC1-206ENST00000559996 AFG3L2Q9Y4W6 797 aa11□□□□□ -0.65
HERC1-206ENST00000559996 NID2Q14112 1375 aa11□□□□□ -0.65
HERC1-206ENST00000559996 DOCK1Q14185 1865 aa11□□□□□ -0.65
HERC1-206ENST00000559996 TRPM7Q96QT4 1865 aa11□□□□□ -0.65
HERC1-206ENST00000559996 KLF18A0A0U1RQI7 1052 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 UNCXA6NJT0 531 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 USP17L5A8MUK1 530 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 ST18O60284 1047 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 DTNBO60941 627 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 CTDNEP1O95476 244 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 TOP1P11387 765 aaKnown RBP10.99□□□□□ -0.65
HERC1-206ENST00000559996 FKBP1BP68106 108 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 ICA1Q05084 483 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 FUT2Q10981 343 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 SCRN1Q12765 414 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 ANKRD1Q15327 319 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 NTRK3Q16288 839 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 NOL8Q76FK4 1167 aaKnown RBP10.99□□□□□ -0.65
HERC1-206ENST00000559996 ARMC9Q7Z3E5 817 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 RAB11FIP4Q86YS3 637 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 ANKRD13AQ8IZ07 590 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 ZNF654Q8IZM8 581 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 PNMA1Q8ND90 353 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 SMC1BQ8NDV3 1235 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 STX8Q9UNK0 236 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 MYH4Q9Y623 1939 aa10.99□□□□□ -0.65
HERC1-206ENST00000559996 ERICH2A1L162 156 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
HERC1-206ENST00000559996 K7ELQ4 463 aaPredicted RBP10.98□□□□□ -0.65
HERC1-206ENST00000559996 RXRAP19793 462 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 NF2P35240 595 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
HERC1-206ENST00000559996 MCM2P49736 904 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 DGKZQ13574 1117 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 MOGSQ13724 837 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 SART3Q15020 963 aaKnown RBP10.98□□□□□ -0.65
HERC1-206ENST00000559996 NBPF11Q86T75 865 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 LRRC47Q8N1G4 583 aaKnown RBP10.98□□□□□ -0.65
HERC1-206ENST00000559996 STAG2Q8N3U4 1231 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 NECAB1Q8N987 351 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
HERC1-206ENST00000559996 MAP3K14Q99558 947 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 ZNF408Q9H9D4 720 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 EMILIN3Q9NT22 766 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 MAD2L2Q9UI95 211 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 SYNPO2Q9UMS6 1093 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 ZHX2Q9Y6X8 837 aa10.98□□□□□ -0.65
HERC1-206ENST00000559996 CCDC69A6NI79 296 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 SPDYE5A6NIY4 337 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms