RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 MTMR4Q9NYA4 1195 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
CHRNB4-204ENST00000559849 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
CHRNB4-204ENST00000559849 GOPCQ9HD26 462 aa16.19■□□□□ 0.18
CHRNB4-204ENST00000559849 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
CHRNB4-204ENST00000559849 TRIM17Q9Y577 477 aa16.19■□□□□ 0.18
CHRNB4-204ENST00000559849 TACC3Q9Y6A5 838 aa16.19■□□□□ 0.18
CHRNB4-204ENST00000559849 HERVK_113P62684 666 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 FAM110CQ1W6H9 321 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 PPP4R3BQ5MIZ7 849 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 OTOP1Q7RTM1 612 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 ANKRD13CQ8N6S4 541 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 MKL1Q969V6 931 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 RPAP3Q9H6T3 665 aaPredicted RBP16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 PLIN4Q96Q06 1357 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 TTLL1O95922 423 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 GNRH1P01148 92 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 GTF3C2Q8WUA4 911 aaPredicted RBP16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 STAG1Q8WVM7 1258 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 SYNPO2Q9UMS6 1093 aa16.18■□□□□ 0.18
CHRNB4-204ENST00000559849 NT5C2P49902 561 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 RRP12Q5JTH9 1297 aaKnown RBP16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 SPICE1Q8N0Z3 855 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 NBPF3Q9H094 633 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 HOXC10Q9NYD6 342 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 MYH4Q9Y623 1939 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 WDR46O15213 610 aaKnown RBP16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 PSMC4P43686 418 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 CAP1Q01518 475 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 COG2Q14746 738 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 KIAA1211Q6ZU35 1233 aa16.17■□□□□ 0.18
CHRNB4-204ENST00000559849 F5H6K3 240 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 RAD21O60216 631 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 FMNL1O95466 1100 aaPredicted RBP16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 PTH1RQ03431 593 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 KLRC3Q07444 240 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 FBXO46Q6PJ61 603 aaPredicted RBP16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 TBC1D10CQ8IV04 446 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 ARHGAP39Q9C0H5 1083 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 RBPJLQ9UBG7 517 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
CHRNB4-204ENST00000559849 ESR2Q92731 530 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 MAP4K1Q92918 833 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 ESYT1Q9BSJ8 1104 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 TCP11L1Q9NUJ3 509 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 STX8Q9UNK0 236 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 LAMA4Q16363 1823 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 HOXD10P28358 340 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 FCGRTP55899 365 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 LBX2Q6XYB7 198 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 GPRC5AQ8NFJ5 357 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 TRIM47Q96LD4 638 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 PTPN22Q9Y2R2 807 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 RABGAP1Q9Y3P9 1069 aa16.15■□□□□ 0.18
CHRNB4-204ENST00000559849 CTGFP29279 349 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 ABHD8Q96I13 439 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 MGAMO43451 1857 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 NMT2O60551 498 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 CDC45O75419 566 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 FLOT1O75955 427 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 PRMT2P55345 433 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 PAGR1Q9BTK6 254 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 TXNRD2Q9NNW7 524 aa16.14■□□□□ 0.17
CHRNB4-204ENST00000559849 DOCK3Q8IZD9 2030 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 CENPFP49454 3210 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 NEDD4P46934 1319 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 SPDYE16A6NNV3 312 aaPredicted RBP16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 NDUFB10O96000 172 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 NOVP48745 357 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 ERVK-24P63145 666 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 POTEEQ6S8J3 1075 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 TTC14Q96N46 770 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 KRT23Q9C075 422 aa16.13■□□□□ 0.17
CHRNB4-204ENST00000559849 HTTP42858 3142 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 MYPNQ86TC9 1320 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 CYP21A2P08686 494 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 DSG3P32926 999 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 Q3C1V9 767 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 SRRDQ9UH36 339 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 ZSWIM8A7E2V4 1837 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 TNPO2O14787 897 aaKnown RBP16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 KDM4AO75164 1064 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 IQCA1Q86XH1 822 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 MB21D1Q8N884 522 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 LSG1Q9H089 658 aaKnown RBP16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 RLFQ13129 1914 aa16.12■□□□□ 0.17
CHRNB4-204ENST00000559849 PEX10O60683 326 aa16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 TRDNQ13061 729 aa16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 CCDC178Q5BJE1 867 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms