RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 PIP4K2BP78356 416 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 DPYDQ12882 1025 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 DHX8Q14562 1220 aaKnown RBP11.44□□□□□ -0.58
LRRC28-216ENST00000559819 IL17AQ16552 155 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 ERCC6LQ2NKX8 1250 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 DYNLL2Q96FJ2 89 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 GPR101Q96P66 508 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-216ENST00000559819 BAG1Q99933 345 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-216ENST00000559819 MCM9Q9NXL9 1143 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 BAZ2BQ9UIF8 2168 aaKnown RBP11.44□□□□□ -0.58
LRRC28-216ENST00000559819 CNTNAP4Q9C0A0 1308 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 MCM7P33993 719 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 ETF1P62495 437 aaKnown RBP11.44□□□□□ -0.58
LRRC28-216ENST00000559819 GRIK5Q16478 980 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 SPECC1LQ69YQ0 1117 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 ZNF397Q8NF99 534 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-216ENST00000559819 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
LRRC28-216ENST00000559819 DESI2Q9BSY9 194 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 NARFQ9UHQ1 456 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 PPP2R2CQ9Y2T4 447 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.44□□□□□ -0.58
LRRC28-216ENST00000559819 SEMA3EO15041 775 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 SCG2P13521 617 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 ATP2C1P98194 919 aaPredicted RBP11.43□□□□□ -0.58
LRRC28-216ENST00000559819 CUL4BQ13620 913 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 MTF1Q14872 753 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 NR1I3Q14994 352 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 RCSD1Q6JBY9 416 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 XDHP47989 1333 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 FAM205AQ6ZU69 1335 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 SYNRGQ9UMZ2 1314 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 ARHGAP6O43182 974 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 ZSCAN20P17040 1043 aaPredicted RBP11.43□□□□□ -0.58
LRRC28-216ENST00000559819 APTXQ7Z2E3 356 aaKnown RBP11.43□□□□□ -0.58
LRRC28-216ENST00000559819 STAG2Q8N3U4 1231 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 FERMT2Q96AC1 680 aa11.43□□□□□ -0.58
LRRC28-216ENST00000559819 DLEC1Q9Y238 1755 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 PPP1R3GB7ZBB8 358 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 PCP11498 1178 aaKnown RBP11.42□□□□□ -0.58
LRRC28-216ENST00000559819 ERCC5P28715 1186 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-216ENST00000559819 CDC25AP30304 524 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 TM4SF1P30408 202 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 TFAP4Q01664 338 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 PFKFB3Q16875 520 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-216ENST00000559819 DZIP1Q86YF9 867 aaKnown RBP11.42□□□□□ -0.58
LRRC28-216ENST00000559819 NYXQ9GZU5 481 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 ANKRD2Q9GZV1 360 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 IL17RBQ9NRM6 502 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 ATP8A2Q9NTI2 1148 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 OGFRQ9NZT2 677 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 ARPP21Q9UBL0 812 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-216ENST00000559819 DDX41Q9UJV9 622 aaKnown RBP11.42□□□□□ -0.58
LRRC28-216ENST00000559819 CTNND2Q9UQB3 1225 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 PHLPP2Q6ZVD8 1323 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 A0A1B0GTH6 734 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 CCP110O43303 1012 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 IGSF3O75054 1194 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 ZPR1O75312 459 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 URI1O94763 535 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-216ENST00000559819 DIXDC1Q155Q3 683 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 SH3RF3Q8TEJ3 882 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-216ENST00000559819 CPLX3Q8WVH0 158 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 FEZ1Q99689 392 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 MTRQ99707 1265 aa11.42□□□□□ -0.58
LRRC28-216ENST00000559819 IRS2Q9Y4H2 1338 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 USP17L3A6NCW0 530 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 USP17L4A6NCW7 530 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 RPS6KA4O75676 772 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 E2F4Q16254 413 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 SPATA1Q5VX52 437 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 USP17L1Q7RTZ2 530 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 SLC44A5Q8NCS7 719 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 C8orf37Q96NL8 207 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 WDR24Q96S15 920 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 A0A0U1RQJ8 604 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 SOWAHDA6NJG2 315 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 ZSCAN12O43309 604 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 KARSQ15046 597 aaKnown RBP11.41□□□□□ -0.58
LRRC28-216ENST00000559819 SLC35G1Q2M3R5 365 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 SBK1Q52WX2 424 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 TYW1BQ6NUM6 668 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 RASGRP2Q7LDG7 609 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 ATRIPQ8WXE1 791 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 KAT14Q9H8E8 782 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
LRRC28-216ENST00000559819 KIAA1551Q9HCM1 1747 aa11.41□□□□□ -0.58
LRRC28-216ENST00000559819 BMP15O95972 392 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 USP5P45974 858 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 RBL2Q08999 1139 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 TPTE2Q6XPS3 522 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 FCHSD1Q86WN1 690 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
LRRC28-216ENST00000559819 NOL10Q9BSC4 688 aaKnown RBP11.4□□□□□ -0.58
LRRC28-216ENST00000559819 ZNF446Q9NWS9 450 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 PRDM4Q9UKN5 801 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 PARP3Q9Y6F1 533 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 LAMB1P07942 1786 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms