RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
TRAF3-207ENST00000559734 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 SERPINB13Q9UIV8 391 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 TACC3Q9Y6A5 838 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 SPTBN5Q9NRC6 3674 aaKnown RBP13.17□□□□□ -0.3
TRAF3-207ENST00000559734 CDK5RAP2Q96SN8 1893 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-207ENST00000559734 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
TRAF3-207ENST00000559734 COBLO75128 1261 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
TRAF3-207ENST00000559734 ZAP70P43403 619 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 FPGSQ05932 587 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 MTX1Q13505 466 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 TIFAQ96CG3 184 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 ZNF576Q9H609 170 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 XPNPEP3Q9NQH7 507 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 TMEM39AQ9NV64 488 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 FOCADQ5VW36 1801 aa13.17□□□□□ -0.3
TRAF3-207ENST00000559734 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
TRAF3-207ENST00000559734 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
TRAF3-207ENST00000559734 STRNO43815 780 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 PGK1P00558 417 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 IGHA2P01877 340 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 RARBP10826 455 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 SEPT2Q15019 361 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 TTC6Q86TZ1 520 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 GAS2L1Q99501 681 aaPredicted RBP13.16□□□□□ -0.3
TRAF3-207ENST00000559734 PHF24Q9UPV7 400 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
TRAF3-207ENST00000559734 PNMA6EA0A0J9YXQ4 647 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 GNAI2P04899 355 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 COG2Q14746 738 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 C1orf53Q5VUE5 145 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 RNF180Q86T96 592 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 MAGEB6Q8N7X4 407 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 MAML3Q96JK9 1138 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 EHD4Q9H223 541 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 THEGQ9P2T0 379 aa13.15□□□□□ -0.3
TRAF3-207ENST00000559734 A0A1W2PQ45 241 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-207ENST00000559734 A0A1W2PQY0 241 aa13.14□□□□□ -0.31
TRAF3-207ENST00000559734 KIAA0355O15063 1070 aa13.14□□□□□ -0.31
TRAF3-207ENST00000559734 POLR3DP05423 398 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-207ENST00000559734 GUCY1A2P33402 732 aa13.14□□□□□ -0.31
TRAF3-207ENST00000559734 SHMT1P34896 483 aa13.14□□□□□ -0.31
TRAF3-207ENST00000559734 CCDC85BQ15834 202 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-207ENST00000559734 SHCBP1Q8NEM2 672 aa13.14□□□□□ -0.31
TRAF3-207ENST00000559734 ADAMTS19Q8TE59 1207 aa13.14□□□□□ -0.31
TRAF3-207ENST00000559734 LENG1Q96BZ8 264 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-207ENST00000559734 MROH8Q9H579 483 aa13.14□□□□□ -0.31
TRAF3-207ENST00000559734 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
TRAF3-207ENST00000559734 MYH1P12882 1939 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 CDH23Q9H251 3354 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 A0A1W2PRG0 241 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 FLOT1O75955 427 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 FCER1AP12319 257 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 PLCD1P51178 756 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 ATG4CQ96DT6 458 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 FAM122AQ96E09 287 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 UHRF1Q96T88 793 aaPredicted RBP13.13□□□□□ -0.31
TRAF3-207ENST00000559734 MMP19Q99542 508 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 PRDM12Q9H4Q4 367 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 STARD7Q9NQZ5 370 aa13.13□□□□□ -0.31
TRAF3-207ENST00000559734 LAMA2P24043 3122 aaKnown RBP13.13□□□□□ -0.31
TRAF3-207ENST00000559734 GRXCR1A8MXD5 290 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 DCDC2CA8MYV0 355 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 APBB1O00213 710 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 PGK2P07205 417 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 IGFBP4P22692 258 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 PLA2G5P39877 138 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 PBX2P40425 430 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 SPICE1Q8N0Z3 855 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 ATXN2LQ8WWM7 1075 aaKnown RBP13.12□□□□□ -0.31
TRAF3-207ENST00000559734 ASB2Q96Q27 587 aa13.12□□□□□ -0.31
TRAF3-207ENST00000559734 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRAF3-207ENST00000559734 TLR7Q9NYK1 1049 aaKnown RBP13.12□□□□□ -0.31
TRAF3-207ENST00000559734 DNAH12Q6ZR08 3092 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 CT47B1P0C2W7 299 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-207ENST00000559734 TAL1P17542 331 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-207ENST00000559734 DSG3P32926 999 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 EVX2Q03828 476 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 FAAP100Q0VG06 881 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 KIAA1755Q5JYT7 1200 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 CLEC10AQ8IUN9 316 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 ABRAQ8N0Z2 381 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 PBX4Q9BYU1 374 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 CCDC8Q9H0W5 538 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-207ENST00000559734 GPR108Q9NPR9 543 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 PRUNE2Q8WUY3 3088 aa13.11□□□□□ -0.31
TRAF3-207ENST00000559734 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 MYO5AQ9Y4I1 1855 aaKnown RBP13.1□□□□□ -0.31
TRAF3-207ENST00000559734 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms