RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 HMGN5P82970 282 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 MAP3K10Q02779 954 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 ICA1Q05084 483 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 GRM4Q14833 912 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 CCDC178Q5BJE1 867 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 USP17L2Q6R6M4 530 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 TMEM179Q6ZVK1 233 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 FERMT3Q86UX7 667 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 ZC3H4Q9UPT8 1303 aaKnown RBP20.17■□□□□ 0.82
CHRNA3-206ENST00000559658 EPHX2P34913 555 aa20.17■□□□□ 0.82
CHRNA3-206ENST00000559658 CTCFLQ8NI51 663 aaPredicted RBP20.17■□□□□ 0.82
CHRNA3-206ENST00000559658 SHISA4Q96DD7 197 aa20.17■□□□□ 0.82
CHRNA3-206ENST00000559658 ZBTB21Q9ULJ3 1066 aa20.17■□□□□ 0.82
CHRNA3-206ENST00000559658 FRMPD2Q68DX3 1309 aaPredicted RBP20.17■□□□□ 0.82
CHRNA3-206ENST00000559658 A0A1W2PRG0 241 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 FMNL1O95466 1100 aaPredicted RBP20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 CALM1P0DP23 149 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 CALM2P0DP24 149 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 CALM3P0DP25 149 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 ZSCAN22P10073 491 aaPredicted RBP20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 PIBF1Q8WXW3 757 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 DOCK1Q14185 1865 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 PDHBP11177 359 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 ECE1P42892 770 aa20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 GLIS2Q9BZE0 524 aaPredicted RBP20.16■□□□□ 0.82
CHRNA3-206ENST00000559658 WDR33Q9C0J8 1336 aaKnown RBP20.15■□□□□ 0.82
CHRNA3-206ENST00000559658 OTOFQ9HC10 1997 aa20.15■□□□□ 0.82
CHRNA3-206ENST00000559658 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
CHRNA3-206ENST00000559658 CAP2P40123 477 aa20.15■□□□□ 0.82
CHRNA3-206ENST00000559658 TCHHQ07283 1943 aa20.15■□□□□ 0.82
CHRNA3-206ENST00000559658 PAPPA2Q9BXP8 1791 aa20.14■□□□□ 0.82
CHRNA3-206ENST00000559658 PALM3A6NDB9 673 aaPredicted RBP20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 CYTH3O43739 400 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 CDKL5O76039 1030 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 F13A1P00488 732 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 INPP5BP32019 993 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 SSRP1Q08945 709 aaKnown RBP20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 NFKBIBQ15653 356 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 FAM173BQ6P4H8 233 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 ACER1Q8TDN7 264 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 TAF1DQ9H5J8 278 aaPredicted RBP20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 KANSL2Q9H9L4 492 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 RBM28Q9NW13 759 aaKnown RBP20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 STK36Q9NRP7 1315 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 MYH15Q9Y2K3 1946 aa20.14■□□□□ 0.81
CHRNA3-206ENST00000559658 CCDC196A0A1B0GTZ2 297 aa20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 PKN1Q16512 942 aa20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 CPLX2Q6PUV4 134 aaKnown RBP20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 ALG1Q9BT22 464 aa20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 NYAP2Q9P242 653 aa20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 PITPNM2Q9BZ72 1349 aa20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 RAD21O60216 631 aa20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 PRKG1Q13976 671 aa20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 EAPPQ56P03 285 aaPredicted RBP20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 KIAA1755Q5JYT7 1200 aa20.13■□□□□ 0.81
CHRNA3-206ENST00000559658 SNHG28P0DPA3 235 aa20.12■□□□□ 0.81
CHRNA3-206ENST00000559658 PDCP20941 246 aa20.12■□□□□ 0.81
CHRNA3-206ENST00000559658 NUP88Q99567 741 aaPredicted RBP20.12■□□□□ 0.81
CHRNA3-206ENST00000559658 CABP5Q9NP86 173 aa20.12■□□□□ 0.81
CHRNA3-206ENST00000559658 V9GY48 417 aaPredicted RBP20.12■□□□□ 0.81
CHRNA3-206ENST00000559658 BAG4O95429 457 aaKnown RBP20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 PARP1P09874 1014 aaKnown RBP20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 C8orf76Q96K31 380 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 MAP3K14Q99558 947 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 UBA5Q9GZZ9 404 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 H3BQV1 296 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 KIF5BP33176 963 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 NBR1Q14596 966 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 PPP2R5BQ15173 497 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 IFFO2Q5TF58 517 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 TTBK2Q6IQ55 1244 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 USP50Q70EL3 339 aaPredicted RBP20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 KCTD1Q719H9 257 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 ZKSCAN4Q969J2 545 aaPredicted RBP20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 MKL1Q969V6 931 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 DCPSQ96C86 337 aaKnown RBP20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 RNF26Q9BY78 433 aaPredicted RBP20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 GPCPD1Q9NPB8 672 aa20.11■□□□□ 0.81
CHRNA3-206ENST00000559658 KLRF2D3W0D1 207 aa20.1■□□□□ 0.81
CHRNA3-206ENST00000559658 DGKZQ13574 1117 aa20.1■□□□□ 0.81
CHRNA3-206ENST00000559658 KRT26Q7Z3Y9 468 aa20.1■□□□□ 0.81
CHRNA3-206ENST00000559658 TRIM22Q8IYM9 498 aa20.1■□□□□ 0.81
CHRNA3-206ENST00000559658 SPICE1Q8N0Z3 855 aa20.1■□□□□ 0.81
CHRNA3-206ENST00000559658 PHIPQ8WWQ0 1821 aa20.1■□□□□ 0.81
CHRNA3-206ENST00000559658 KIF28PB7ZC32 967 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 ZNF543Q08ER8 600 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 RESTQ13127 1097 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 ZYXQ15942 572 aaKnown RBP20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 FBXO18Q8NFZ0 1043 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 WRNIP1Q96S55 665 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 KCNJ14Q9UNX9 436 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 PPP2R3BQ9Y5P8 575 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 PRPF3O43395 683 aaKnown RBP20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 DEXIO95424 95 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 NDUFB10O96000 172 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 CCDC96Q2M329 555 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 KRT40Q6A162 431 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 USP48Q86UV5 1035 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms