RNA–Protein interactions for RNA: ENST00000559591.5

KNSTRN-207, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-207ENST00000559591 LRRFIP2Q9Y608 721 aaKnown RBP12.46□□□□□ -0.41
KNSTRN-207ENST00000559591 PI4K2BG5E9Z4 385 aa12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 SURF6O75683 361 aaKnown RBP12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 HMGB1P09429 215 aaKnown RBP12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 COL6A1P12109 1028 aa12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 ITGB8P26012 769 aa12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 SNAPC2Q13487 334 aa12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 MRFAP1L1Q96HT8 127 aa12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 PODXL2Q9NZ53 605 aa12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 CSADQ9Y600 493 aa12.45□□□□□ -0.42
KNSTRN-207ENST00000559591 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 MAST2Q6P0Q8 1798 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 PNMA6EA0A0J9YXQ4 647 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 GJB2P29033 226 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 MMP14P50281 582 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 GSDMDP57764 484 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 ERMP1Q7Z2K6 904 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 DNAAF4Q8WXU2 420 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 PRDM12Q9H4Q4 367 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 HMX1Q9NP08 348 aaPredicted RBP12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 CNPY2Q9Y2B0 182 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 REV3LO60673 3130 aa12.44□□□□□ -0.42
KNSTRN-207ENST00000559591 CLRN2A0PK11 232 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 SPDYE5A6NIY4 337 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 PDHXO00330 501 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 MYO1BO43795 1136 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 GADD45BO75293 160 aaPredicted RBP12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 IGFBP4P22692 258 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 KCTD2Q14681 263 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 NECTIN1Q15223 517 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 HDGFL1Q5TGJ6 251 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 KIAA0825Q8IV33 1275 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 MAP4K1Q92918 833 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 CLSTN2Q9H4D0 955 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 VEZTQ9HBM0 779 aa12.43□□□□□ -0.42
KNSTRN-207ENST00000559591 UTYO14607 1347 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 CCDC66A2RUB6 948 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 APBB1O00213 710 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 TNPO2O14787 897 aaKnown RBP12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 BCRP11274 1271 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 MYL6BP14649 208 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 CASTP20810 708 aaKnown RBP12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 DLGAP5Q15398 846 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 G2E3Q7L622 706 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 PLA2G4DQ86XP0 818 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 TIFAQ96CG3 184 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 NAT10Q9H0A0 1025 aaKnown RBP12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 TNMDQ9H2S6 317 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 IMPACTQ9P2X3 320 aa12.42□□□□□ -0.42
KNSTRN-207ENST00000559591 F6X3S4 739 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 IRF6O14896 467 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 RGS20O76081 388 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 HMGCRP04035 888 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 IFIT2P09913 472 aaKnown RBP12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 ZSCAN20P17040 1043 aaPredicted RBP12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 TYRO3Q06418 890 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 ADGRE1Q14246 886 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 BLOC1S2Q6QNY1 142 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 ZNF687Q8N1G0 1237 aa12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
KNSTRN-207ENST00000559591 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 ECM29Q5VYK3 1845 aa12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 FIBPO43427 364 aa12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 RASA3Q14644 834 aa12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 BEND3Q5T5X7 828 aa12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 STRIP1Q5VSL9 837 aa12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 NAA16Q6N069 864 aaPredicted RBP12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 CCDC112Q8NEF3 446 aa12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 SPOCK2Q92563 424 aa12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 TRMT112Q9UI30 125 aaKnown RBP12.4□□□□□ -0.42
KNSTRN-207ENST00000559591 DCHS1Q96JQ0 3298 aa12.4□□□□□ -0.43
KNSTRN-207ENST00000559591 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.43
KNSTRN-207ENST00000559591 GOLGA6L19H0YKK7 550 aa12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 TPM1P09493 284 aa12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 ZNF75DP51815 510 aa12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 TRIM32Q13049 653 aa12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 ERO1BQ86YB8 467 aa12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 BADQ92934 168 aa12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 SPATA32Q96LK8 384 aa12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 JAKMIP1Q96N16 626 aaKnown RBP12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 PARK7Q99497 189 aaKnown RBP12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 SRRTQ9BXP5 876 aaKnown RBP12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 TTC12Q9H892 705 aaPredicted RBP12.39□□□□□ -0.43
KNSTRN-207ENST00000559591 ATP8B1O43520 1251 aa12.38□□□□□ -0.43
KNSTRN-207ENST00000559591 GFRA3O60609 400 aa12.38□□□□□ -0.43
KNSTRN-207ENST00000559591 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
KNSTRN-207ENST00000559591 TPM4P67936 248 aa12.38□□□□□ -0.43
KNSTRN-207ENST00000559591 OS9Q13438 667 aaPredicted RBP12.38□□□□□ -0.43
KNSTRN-207ENST00000559591 STX1AQ16623 288 aa12.38□□□□□ -0.43
KNSTRN-207ENST00000559591 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms